DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp10D and F25H5.7

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_492454.1 Gene:F25H5.7 / 172740 WormBaseID:WBGene00009129 Length:490 Species:Caenorhabditis elegans


Alignment Length:328 Identity:84/328 - (25%)
Similarity:149/328 - (45%) Gaps:23/328 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  1220 KRRRNNCRKTTKDSRANDNMSLPDSVIEQNR--PILIKNFAEHYRLMSADSDFRFSEEFEELKHV 1282
            :.::...:|..|:.:.|.:    :||.|.|.  |....:..:.:...:|....:...:..:.|..
 Worm   128 EEKKEQSKKVNKEKKMNKS----ESVDEDNEQPPEPGSDPRKIWAFKAAKMKCQAISKLHQDKIK 188

  Fly  1283 GRDQP-CTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANY--VPGHNSPREFIVT 1344
            |...| ||:.....|...||:.::...:.:|..|:..|    .|||:|::  :||.:. ..:|.|
 Worm   189 GYMPPNCTYTAYDANPDLNRYADVRCIEETRVVLKNHD----RDYIHASWMRMPGKDQ-STYITT 248

  Fly  1345 QGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTVPVF-YGDIKVQI--LNDSH 1406
            ||||..|..|||.|.::.....::||...||.|.|||..|:|.....|. :|..::.:  ..:..
 Worm   249 QGPLPETLSDFWHMIYQEKIAYVLMLCTLFEGGVEKCALYYPEKLGEVVKFGKYEITLTECKEEA 313

  Fly  1407 YADWVMTEFMLCR----GSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPIVVH 1467
            .|..:.....:..    .||...:.|.....|||...|...:.::...:..: ::..::.||.||
 Worm   314 IAGTIWNALTVTNTEDASSEPLYMNHVQVPWWPDQLAPEDARPMIELYKWVK-KVNPKETPICVH 377

  Fly  1468 CSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLLAVLEGKE 1532
            |||||||:.||:.:|....:|..:..:::..||..||..|...||:..|::.::..|:....| |
 Worm   378 CSAGVGRTATFVGIDYATIRIMENPNIEMLDIVREMRAMRFQAVQSHMQFLFLYVVLMEYFIG-E 441

  Fly  1533 NIV 1535
            .:|
 Worm   442 GVV 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 71/262 (27%)
PTPc 1298..1525 CDD:238006 65/235 (28%)
F25H5.7NP_492454.1 PTPc 192..436 CDD:214550 70/249 (28%)
PTPc 205..436 CDD:238006 66/236 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.