DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp10D and T22C1.8

DIOPT Version :10

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_492194.1 Gene:T22C1.8 / 172571 WormBaseID:WBGene00011918 Length:591 Species:Caenorhabditis elegans


Alignment Length:466 Identity:120/466 - (25%)
Similarity:192/466 - (41%) Gaps:84/466 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1286 QPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHS 1350
            ||........|..|||:.:::..|.:|..|.  |..:| |||:||||.|.|:|  ||:|||...:
 Worm   141 QPMERKIFDANPTKNRYKDVVCNDITRVILS--DGGDG-DYIHANYVNGLNAP--FILTQGATAA 200

  Fly  1351 TRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEF 1415
            |..|||||...:.:..||||....|.|:.||.||:|...     |:...       :..|.    
 Worm   201 TVIDFWRMVVHTKTAYIVMLCEVMEDGKAKCAQYYPEKA-----GEAMT-------FGAWT---- 249

  Fly  1416 MLCR--------------------GSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAE 1460
            :||.                    ..::.||:|.|..:|||..|||....|:|.:...|...|  
 Worm   250 ILCSLEDDKDANIIKRTLSVRNVDNGKEHILKHLHTKSWPDRCVPNSTMALLRMLYIVRTASG-- 312

  Fly  1461 QRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLL 1525
              |:.||||||:||:|||:.::..||.:.....:|:.|...|:|..|...:|.:.||:.:.|.|:
 Worm   313 --PVTVHCSAGIGRTGTFVAIEACLQILTDGKELDLLGTCRALRNSRAGSIQVDIQYMALVQILI 375

  Fly  1526 AVLEGKENIVGPAREMHDNE---GYEGQQ-VQLDENGDVVATI--------------------EG 1566
            ..  ||:|......::.|..   .:..|| :|.....|.|.|.                    :.
 Worm   376 NY--GKDNGYWDDSDLDDRVELLTWNIQQFIQTRGKVDHVPTTPSTPALNIIPADAKPVPVVPKE 438

  Fly  1567 HLSHHDLQQAEAEAIDDENAAIL---------HDDQQPLTSSFTGHHTH-MPPTTSMSSFGGGGG 1621
            ...||...:...|.::.....||         .:.:.|.|........| :|..|..||..|...
 Worm   439 ATPHHSPAEKAQECMEKICEKILKPIKKDKECKEHKSPKTEHPKECKDHPLPLETRSSSEDGPDM 503

  Fly  1622 GHTNVDAPDRXHSVVNQSDNNNSVVIVLVDNKP---SSMICKDSKGGNIDVLESQQQQQQQQQQQ 1683
            ......|..: ......:..|:::.::.:.|:|   ..::.|:||.||.|..::::.::.:..::
 Worm   504 EDQKTQATQKVEIKEETAAQNDNISMISLPNEPLLSIPVVRKNSKDGNKDSCDTKESKETKGHEK 568

  Fly  1684 PNQGGHNITTI 1694
            .|....|...:
 Worm   569 KNSKEGNFKLV 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:394996
fn3 220..304 CDD:394996
FN3 278..>734 CDD:442628
FN3 583..671 CDD:238020
fn3 787..850 CDD:394996
fn3 866..935 CDD:394996
fn3 959..1043 CDD:394996
PTP_tm 1083..1187 CDD:465889
R3-PTPc 1301..1522 CDD:350396 78/240 (33%)
T22C1.8NP_492194.1 Y_phosphatase 151..376 CDD:459674 83/249 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.