DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and T22C1.8

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_492194.1 Gene:T22C1.8 / 172571 WormBaseID:WBGene00011918 Length:591 Species:Caenorhabditis elegans


Alignment Length:466 Identity:120/466 - (25%)
Similarity:192/466 - (41%) Gaps:84/466 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1286 QPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHS 1350
            ||........|..|||:.:::..|.:|..|.  |..:| |||:||||.|.|:|  ||:|||...:
 Worm   141 QPMERKIFDANPTKNRYKDVVCNDITRVILS--DGGDG-DYIHANYVNGLNAP--FILTQGATAA 200

  Fly  1351 TRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEF 1415
            |..|||||...:.:..||||....|.|:.||.||:|...     |:...       :..|.    
 Worm   201 TVIDFWRMVVHTKTAYIVMLCEVMEDGKAKCAQYYPEKA-----GEAMT-------FGAWT---- 249

  Fly  1416 MLCR--------------------GSEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAE 1460
            :||.                    ..::.||:|.|..:|||..|||....|:|.:...|...|  
 Worm   250 ILCSLEDDKDANIIKRTLSVRNVDNGKEHILKHLHTKSWPDRCVPNSTMALLRMLYIVRTASG-- 312

  Fly  1461 QRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQCLL 1525
              |:.||||||:||:|||:.::..||.:.....:|:.|...|:|..|...:|.:.||:.:.|.|:
 Worm   313 --PVTVHCSAGIGRTGTFVAIEACLQILTDGKELDLLGTCRALRNSRAGSIQVDIQYMALVQILI 375

  Fly  1526 AVLEGKENIVGPAREMHDNE---GYEGQQ-VQLDENGDVVATI--------------------EG 1566
            ..  ||:|......::.|..   .:..|| :|.....|.|.|.                    :.
 Worm   376 NY--GKDNGYWDDSDLDDRVELLTWNIQQFIQTRGKVDHVPTTPSTPALNIIPADAKPVPVVPKE 438

  Fly  1567 HLSHHDLQQAEAEAIDDENAAIL---------HDDQQPLTSSFTGHHTH-MPPTTSMSSFGGGGG 1621
            ...||...:...|.::.....||         .:.:.|.|........| :|..|..||..|...
 Worm   439 ATPHHSPAEKAQECMEKICEKILKPIKKDKECKEHKSPKTEHPKECKDHPLPLETRSSSEDGPDM 503

  Fly  1622 GHTNVDAPDRXHSVVNQSDNNNSVVIVLVDNKP---SSMICKDSKGGNIDVLESQQQQQQQQQQQ 1683
            ......|..: ......:..|:::.::.:.|:|   ..::.|:||.||.|..::::.::.:..::
 Worm   504 EDQKTQATQKVEIKEETAAQNDNISMISLPNEPLLSIPVVRKNSKDGNKDSCDTKESKETKGHEK 568

  Fly  1684 PNQGGHNITTI 1694
            .|....|...:
 Worm   569 KNSKEGNFKLV 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 84/258 (33%)
PTPc 1298..1525 CDD:238006 81/246 (33%)
T22C1.8NP_492194.1 PTPc 130..376 CDD:214550 85/259 (33%)
PTPc 153..376 CDD:238006 82/247 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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