DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptprjb.1

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_017209718.2 Gene:ptprjb.1 / 101883510 ZFINID:ZDB-GENE-090304-1 Length:1104 Species:Danio rerio


Alignment Length:1460 Identity:339/1460 - (23%)
Similarity:510/1460 - (34%) Gaps:427/1460 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 WLYYTNF----THHDWLTWTVTITTAPDPPSNLSVQVRSGKNAIILWSPPTQGSYTAFKIKVLGL 161
            :|.:.||    ||...::.|.|.:|   ||::.:               .||.:.|         
Zfish    17 FLLHQNFSATTTHSSTVSPTTTFST---PPASTN---------------ETQATPT--------- 54

  Fly   162 SEASSSYNRTFQVNDNTFQHSVKELTPGATYQVQAYTIYDGKESVAYTSRNFTTKPNTPGKFIVW 226
                     |...:.||   |..:.||..|         ....:.:.|:...||...||......
Zfish    55 ---------TPSTSANT---SESQTTPHTT---------PPSSTSSSTTETHTTASTTPSTSANT 98

  Fly   227 FRNETTLLVLWQPPYPAGIYTHYKVSIEPPDANDSVLYVEKEGEPPGPAQAAFKGLVPGRAYNIS 291
            ..::|||       :.....|.:..|.||.....|.        ||....:              
Zfish    99 SESQTTL-------HTTATATAHSSSTEPTTLTTSA--------PPASTSS-------------- 134

  Fly   292 VQTMSEDEISLPTTAQYRTVPLRPLNVTFDRDFITSNSFRVLWEAPKGISEFDKYQVSVATTRRQ 356
                     |...|....|.|....:.|.:                   |:...:..:::||...
Zfish   135 ---------STTETTTTSTTPSTSTSTTTE-------------------SQTTTHMTAISTTHFS 171

  Fly   357 ST-VPRSNEPVAFFDFRDIAEPGKTFNVIVKTVSGKVTSWPATGDVTLRPLPVRNLRSINDDKTN 420
            || ...|..|.:         |..|.:...:|    .|:.|.||..|.                 
Zfish   172 STESTTSTAPTS---------PVFTSSSTTET----QTTTPTTGTATT----------------- 206

  Fly   421 TMIITWEADPASTQDEYRIVYHELETFNGDTSTLTTDRTRFTLESLLPGRNYSLSVQAVSKKMES 485
                  .:...|||.:            ..||||.|..:..|.|:..|       :.:|:....|
Zfish   207 ------HSSSTSTQSQ------------TSTSTLPTSTSSSTTETTTP-------LASVTTHSSS 246

  Fly   486 NETSIFVVTRPSSPIIEDLKSIRMGLNISWKSDVNSKQEQYEVLYSRNGTSDLRTQKTKESRLVI 550
            .:||.|.:|..|:                                         :..|.|:....
Zfish   247 TQTSTFPITSAST-----------------------------------------SSSTNETHTTP 270

  Fly   551 KNLQPGAGYELKVFAVSHDLRSEPHAYFQAVYPNPPRNMTIETVRSNSVLVHWSPPESGEFTEYS 615
            ..|...|...:.....:.|..|...   |...|            |.:|..|.|..||...|..:
Zfish   271 TTLSTSASTPITSHTTATDSSSTGS---QTSTP------------STTVTTHTSSTESPTSTSST 320

  Fly   616 IRYRTDSEQQWVRLPSVRSTEADITDMTKGEKYTIQVNTVSFGVESPVPQEVNTTVPPNPVSNII 680
            ....|.|.   ....:...:..|.||.|..:..|....:.|..:.|.     :||....|.|.  
Zfish   321 SHTSTGSS---TTSQTTAYSSTDTTDYTSTDSQTSTPTSTSHTITSS-----HTTQSTGPTST-- 375

  Fly   681 QLVDSRNITLEWPKPEGRVESYILKWWPSDNPGRVQTKNVSENKSADDLSTVRVLIGELMPGVQY 745
            :..||...|....:..|..::          .|..||...::..|:...|......|    ..|.
Zfish   376 ETTDSSTQTSGSTQTSGSTQT----------SGSTQTSGSTQTSSSTQTSGSTQTSG----STQT 426

  Fly   746 KFDIQTTSYGILSGITSLYPRTMPLIQSDVVVANGEKEDERDTITLSYTPTPQSSSKFDIYRFSL 810
            ....||:|....||.|    :|...||:     :|..:....|.|...|.|..|:.       :.
Zfish   427 SSSTQTSSSTQTSGST----QTSGSIQT-----SGSAQTSGSTQTSGSTQTSGSTQ-------TS 475

  Fly   811 GDAEIRDKEKLANDTDRKVTFTGLVPGRLYNITVWTVSGGVASLPIQRQDRLYPEPITQLHATNI 875
            |..:.....:.:..|...|:.|.       ..|.:|.                |.|.:....|..
Zfish   476 GSTQTSGSTQTSGSTQTSVSSTA-------TATTYTP----------------PMPSSASSTTFT 517

  Fly   876 TDTEISLRWDLPKGEYNDFDIAYLTADNLLAQNMTTRNEITISDLRPHRNYTFTVVVRSGTESSV 940
            |.|..::.                |.........||....|:|.                |.:|.
Zfish   518 THTPSTVS----------------TTSASTTATSTTHTPTTVST----------------TSAST 550

  Fly   941 LRSSSPLSASFTTNEAVPGRVERFHPTDVQPSEINFEWSLPSSEANGVIRQFSIAYTNINNLTDA 1005
            ..:::..:.:..|....|....:|..:|:..|.:|..|.....:.         ||..: |.||.
Zfish   551 TAATTDSNQTSPTTTPKPDLNWKFTVSDITTSSVNLTWQAIDKDT---------AYYKL-NWTDG 605

  Fly  1006 GMQ--DFESEEAFGVIKNLKPGETYVFKIQAKTAIGFGPEREYRQTMPI----LAPPRPATQVVP 1064
            |.|  ...:...|..:.||..|..|.|.|.|...:..       ::.|:    ...|...:.:..
Zfish   606 GTQRNGTNTTALFYWVTNLAAGVNYTFCITAVNQLSV-------ESDPVCISSFTKPNVVSNLTA 663

  Fly  1065 TEVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIVAEDDAKNASGLEMPSWLDVQSYSVWLPYQAID 1129
            ::|..||.|:       :::..:|.:..|.:                         .|...::.|
Zfish   664 SKVTTSSVTL-------HWNAPSGPIDYYLV-------------------------EWSVQRSTD 696

  Fly  1130 PYYPFENRSVEDFTIGTENCDNHKIGYCNGPLKSGTTYRVKVRAFTGADK--------FTDTAYS 1186
                  .|:.|.|.:.|:             |...|.|.:.|.|.||..|        .||....
Zfish   697 ------RRTNETFYVITD-------------LMPATKYEIHVSAVTGGIKSELVFLTVLTDVEAG 742

  Fly  1187 FPIQTDQDNTSLIVAITVPLTIILVLLVTLLFYKRRRNNCRKTTKDSRANDNMSLPDSVI-EQNR 1250
               .|..:||.:||.|.:.|..::..::..:|:..||.: :|...|        :|..:| :|.:
Zfish   743 ---PTSTNNTGMIVGIVLTLICLIAAIILFVFFYSRRQS-KKQYPD--------IPVHMIRDQTK 795

  Fly  1251 PIL-IKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFK 1314
            ..| ::::.|:::..||||:..|:||:||||.||..|....|....|:.|||::|:||||.||.|
Zfish   796 NALKVEDYEEYFKRNSADSNCGFAEEYEELKSVGTQQSKAAALAIENKAKNRYSNVLPYDASRVK 860

  Fly  1315 L----QPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFE 1375
            |    .|.|     ||||||:|||:||.:|||..||||..|.::||||.||.|...|||||:|.|
Zfish   861 LSMCGSPFD-----DYINANHVPGYNSRKEFIAAQGPLPVTLNEFWRMIWEKNVYTIVMLTKCNE 920

  Fly  1376 KGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEFML--CRGSEQRILRHFHFTTWPDFG 1438
            .||.||::|||:.|  ..|.:|.|...::....||.:.:|.:  .:.:|.|.:|.||||.|||.|
Zfish   921 MGRVKCEKYWPSAT--SHYNNISVTTTSEIELDDWTIRDFRIKNVKTAETRYVRQFHFTAWPDHG 983

  Fly  1439 VPNPPQTLVRFVRAFRDRIGAEQR--PIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVY 1501
            ||...:.|:.|....|:.:....|  |.||||||||||:||||.:|.:..||.....|||:|||:
Zfish   984 VPETTEILIDFRHLVREHMDQYSRHSPTVVHCSAGVGRTGTFIAIDHLSFQIERDSMVDIYGIVH 1048

  Fly  1502 AMRKERVWMVQTEQQYICIHQCLLAVLEGK 1531
            .||..|..|||||.||:.:|||...::..:
Zfish  1049 DMRMHRALMVQTEDQYVYLHQCAYDLIRSR 1078

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 12/80 (15%)
fn3 220..304 CDD:278470 12/83 (14%)
fn3 315..391 CDD:278470 11/76 (14%)
FN3 405..494 CDD:238020 16/88 (18%)
FN3 511..574 CDD:238020 6/62 (10%)
FN3 583..671 CDD:238020 18/87 (21%)
fn3 683..753 CDD:278470 13/69 (19%)
fn3 787..850 CDD:278470 11/62 (18%)
fn3 866..935 CDD:278470 9/68 (13%)
fn3 961..1043 CDD:278470 20/83 (24%)
PTPc 1272..1525 CDD:214550 127/260 (49%)
PTPc 1298..1525 CDD:238006 115/234 (49%)
ptprjb.1XP_017209718.2 NupH_GANP 450..>493 CDD:318883 8/54 (15%)
FN3 568..653 CDD:238020 22/101 (22%)
FN3 655..729 CDD:238020 21/124 (17%)
PTPc 817..1071 CDD:214550 126/260 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 1 1.000 - - FOG0001181
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106915
Panther 1 1.100 - - O PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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