DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptprh

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_017209510.2 Gene:ptprh / 100535694 ZFINID:ZDB-GENE-091118-90 Length:1068 Species:Danio rerio


Alignment Length:1128 Identity:314/1128 - (27%)
Similarity:492/1128 - (43%) Gaps:207/1128 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   499 PIIEDLK-SIRMGLNISWKSDVNSKQEQYEVLYSRNG-TSDLRTQKT-KESRLVIKNLQPGAGYE 560
            |.:.|:: :.|....::::.|.......|..:..|:| .||:.|..| .:....:.:|..|..|.
Zfish    22 PDVNDVRITHRTETELTFQWDKAGGSNSYSYILRRDGIDSDIITAGTVNQVTYKVSDLSSGTNYN 86

  Fly   561 LKVFAVSHDLRSEPHAYFQAVYPNPPRNMTIETVRSNSVLVHWSPPESGEFTEYSIRY--RTDSE 623
            ..:|.|..|.|||...:..|..|....::::......::.:.|. .:..|:: |::.|  :.|:.
Zfish    87 WTLFTVFGDQRSEGKNFSAATVPPNVESVSVIDQSETTITLQWK-KDKAEYS-YNLTYGDKVDTP 149

  Fly   624 QQWVRLPSVRST-EADITDMTKGEKYTIQVNTVSFGVESPVPQEVNTTVPPNPVSNIIQLVD--S 685
                  ||.:|| |..:|.::.|..|:..:.||..|::|........|||||..|  :.::|  .
Zfish   150 ------PSPQSTVEYTVTSLSPGTNYSFTLYTVFEGLKSSGFSFFAVTVPPNVES--VSVIDQSE 206

  Fly   686 RNITLEWPKPEGRVESYILKWWPSDNPGRVQTKNVSENKSADDLSTVRVLIGELMPGVQYKFDIQ 750
            ..|||:|.|.:... ||.|.:     ..:|||.:..:       |.|...:..|.||.:|.|.:.
Zfish   207 TTITLQWKKDKAEY-SYNLTY-----EDKVQTPSSPQ-------SPVEYTVTSLSPGTKYTFTLY 258

  Fly   751 TTSYGILSGITSLYPRTMP-LIQSDVVVANGEKEDERDTITLSYTPTPQSSSKFDIYRFSLGDAE 814
            |...|:.|...|....|:| .|....|:...|     ..:|..:|      .:.|.|.:.|    
Zfish   259 TVFEGLKSSGFSFSAVTVPSKITGFSVIGRSE-----TALTFQWT------KEKDEYTYEL---- 308

  Fly   815 IRDKEKLANDTDRKVTF---------TGLVPGRLYNITVWTVSGGVASLPIQRQDRLYPEPITQL 870
              ||    :|.:.:::|         |.|.||..|:..::.|..||.|......:...|..:..:
Zfish   309 --DK----SDANTQISFTDTTVVCLITSLSPGTEYSYNLYAVFEGVKSQAKGISEVTVPSNVENV 367

  Fly   871 HATNITDTEISLRWDLPKGEYNDFDIAYLTADNLLAQNM--TTRNEIT--ISDLRPHRNYTFTVV 931
            ......||::.|:|:....|.|.::  |:...|.:.:::  ||.|||.  :|.|.|..||.||:.
Zfish   368 SVVEANDTDVILQWNAVPNEQNKYN--YILKYNDVEESVDFTTENEIKHHVSGLIPATNYNFTLH 430

  Fly   932 VRSGTESSVLRSSSPLSASFTT--NEAVPGRVERFHPTDVQPSEINFEWSLPSSEANGVIRQFSI 994
            ....::     :|:..:.:.||  :.....||.|      ..:|:..||:             .:
Zfish   431 TEFYSQ-----NSTGYNFNHTTFLSSVTEVRVNR------SLTELTVEWN-------------KL 471

  Fly   995 AYTNINNLT----DAGMQDFESEEAFG-VIK----NLKPGETYVFKIQAKTAIGFGPEREYRQTM 1050
            ...|:.|.|    |....||......| |||    :||||..|.|.:...:......|..::...
Zfish   472 NQNNVYNYTLLRSDGAEIDFTGSAVVGDVIKHKYSSLKPGTVYSFTLFTVSNNVRSSEHSFKSIT 536

  Fly  1051 PILAPP---RPATQVVPTEVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIVAEDDAKNAS----GL 1108
            .:....   :.....:..:||..:          |.:.||          :....||||    .:
Zfish   537 ALDCASFNWKVTNTSIVADVYGCT----------YVTAQN----------SSGSGKNASIEGDKV 581

  Fly  1109 EMPSWLDVQSYSVWLPYQAIDPYYPFENR---------SVEDFTIGTENCDNHKIGY-------- 1156
            .:......:||:|.|       :|..|::         ::..:.:....|:.|..||        
Zfish   582 NLRDLYPGESYTVSL-------FYNLESKMLTQCSQRLTLVPYVVSNLKCEYHSGGYGLAVMWDY 639

  Fly  1157 ----------------------CNGP-------LKSGTTYRVKVRAFTGADKFTDTAYSFPIQTD 1192
                                  .:.|       |::...|:||..:|:||.:    :.:..|...
Zfish   640 PDGVVDVVEVDVNKKSFNHSHGSDEPTQQLVTGLQAAQWYKVKATSFSGARR----SETILINCQ 700

  Fly  1193 QDNTSLIVAITVPLTIILVLLVTLLF---YKRRRNNCRKTTKDSRANDNMSLPDSVIEQN-RPIL 1253
            .|...:|..:.|...:::::...:..   ||..|||....:.|.:          |.::| :.|.
Zfish   701 TDPAGVIAGVLVFFLLVIIICAGVFVWFRYKSARNNGPDASADLK----------VSKKNYKTIA 755

  Fly  1254 IKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPV 1318
            ...|.||:|.||.|.:..||.|:::|..||.:|....|.||.|:.||||:|:||||.||..| .:
Zfish   756 CDKFPEHFRNMSRDDNRAFSAEYDDLSSVGVEQSKVAALLPENKDKNRFSNVLPYDTSRVHL-TI 819

  Fly  1319 DDDEGSDYINANYVPGH-NSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCD 1382
            :....||||||||:||: |:.||:|..||||.||.:|||||.||..|..|||:|.|.|.||.||:
Zfish   820 NKAGDSDYINANYMPGYGNASREYIAAQGPLPSTVNDFWRMIWEKKSSTIVMVTNCTEGGRVKCE 884

  Fly  1383 QYWPNDTVPVFYGDIKVQILNDSHYADWVMTEFMLCR--GSEQRILRHFHFTTWPDFGVPNPPQT 1445
            ||||.|..|..|.::.|.:.:::....|.:.||.:..  .||.|.:||||||.|||.|||...:.
Zfish   885 QYWPLDYTPCLYENLLVTVKSENKSQSWTLREFNVKNKMTSETRTVRHFHFTAWPDHGVPRGTEE 949

  Fly  1446 LVRFVRAFRDRIGA--EQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERV 1508
            |::|....|..|.:  ...|.||||||||||:||.|.||.:|||:|....|.:...|..||..|.
Zfish   950 LIQFRDLIRQHIESHFSTGPTVVHCSAGVGRTGTLIALDVLLQQLNREKAVGVAAFVQEMRLNRP 1014

  Fly  1509 WMVQTEQQYICIHQCLLAVLEGK 1531
            .|||||.||:.:|||:|..|:.|
Zfish  1015 LMVQTESQYVFLHQCILDSLQTK 1037

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020 16/64 (25%)
FN3 583..671 CDD:238020 18/90 (20%)
fn3 683..753 CDD:278470 20/71 (28%)
fn3 787..850 CDD:278470 15/71 (21%)
fn3 866..935 CDD:278470 20/72 (28%)
fn3 961..1043 CDD:278470 21/90 (23%)
PTPc 1272..1525 CDD:214550 126/257 (49%)
PTPc 1298..1525 CDD:238006 115/231 (50%)
ptprhXP_017209510.2 FN3 26..98 CDD:214495 16/71 (23%)
FN3 109..182 CDD:238020 17/80 (21%)
FN3 <156..352 CDD:225936 60/231 (26%)
FN3 193..260 CDD:214495 23/81 (28%)
FN3 361..>429 CDD:238020 20/69 (29%)
RPA_2b-aaRSs_OBF_like 455..533 CDD:324543 23/96 (24%)
PTPc 800..1032 CDD:238006 115/232 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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