DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and XB5906919

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_002939016.3 Gene:XB5906919 / 100497391 XenbaseID:XB-GENE-5906920 Length:578 Species:Xenopus tropicalis


Alignment Length:495 Identity:97/495 - (19%)
Similarity:159/495 - (32%) Gaps:184/495 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   658 GVES-PVPQEVNTTVPPNPVSNIIQLVDSRNITLEWPK--------PEGRVESYILKWWPSDNPG 713
            |.:| ||   :|..:|  ||...:...::||..|...:        .:|..||.||         
 Frog    43 GAQSYPV---INGDIP--PVCRHVYEANARNSQLCGHRYAELINKIKQGGGESAIL--------- 93

  Fly   714 RVQTKNVSENKSADDLSTVRVLIG-----ELMP----GVQYKFDIQTTSYGILSGITSLYPRTMP 769
                ::...||.......:|:|:.     ||.|    |:.|.   ...|.|.|:|:..:......
 Frog    94 ----RHTQRNKKLLVRERLRMLLDDESFLELSPMAGLGLPYG---DVPSAGCLTGVGKICGVWCV 151

  Fly   770 LIQSDVVVANGEKEDERDTITLSYTPTPQSSSKFDIYRFSLGDAEIRDKEKLANDTDRKVTFTGL 834
            .|.:|..|..|             |..|.|..|           ::|.:|         :.....
 Frog   152 FISNDATVKGG-------------TAYPISVKK-----------QLRAQE---------IAIQNR 183

  Fly   835 VPGRLYNITVWTVSGGVASLPIQRQDRLYPEPITQLHATNITDTEISLRWDLPK----------- 888
            :|      ||:.|..|.|.||:|.:  |:|:  .|.......:..|.....:|:           
 Frog   184 LP------TVYLVDSGGAFLPLQAE--LFPD--KQHGGRTFYNEAIMSAMKIPQVAVVCGSCTAG 238

  Fly   889 GEYNDFDIAYLTADNLLAQNMTTRNEITISDLRPHRNYTFTVVVRSGTESSVLRSSSPLSASFTT 953
            |.|                 :.|..|.|:            :|.:.||   :..:..||..:.|.
 Frog   239 GAY-----------------IPTMAEETV------------IVDKIGT---IFLAGPPLVKAATG 271

  Fly   954 NEA-------------VPGRVERFHPTDVQP--------SEINF--------EWSLPSSEANGVI 989
            .:.             |.|.|:.|..|:.:.        |.:||        |:..|..:||.:.
 Frog   272 EDVSAENLGGAKLHSRVSGCVDHFASTEAEAYTCARHIISSLNFDPVPEDSSEYENPLYDANELT 336

  Fly   990 RQFSIAYTNINNL-----------------TDAG---MQDFESEEA--FGVIKNLKPGE-TYVFK 1031
            ....:.|.:..|:                 .|.|   :..|.|.|.  .|::.|  .|| |:...
 Frog   337 GLAPLNYKSTLNIKLILSRLLDGSRLLEFKADYGTTLVAGFASVEGNLVGIVAN--NGELTHDAS 399

  Fly  1032 IQAKTAIGFGPEREYRQTMPILAPPRPATQ-VVPTEVYRS 1070
            ::....:....:|    .:|:|.....|:| .|||.|.::
 Frog   400 LKGSHFVQLCNQR----GIPLLFLQNTASQESVPTNVVKA 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020 5/13 (38%)
fn3 683..753 CDD:278470 17/86 (20%)
fn3 787..850 CDD:278470 10/62 (16%)
fn3 866..935 CDD:278470 9/79 (11%)
fn3 961..1043 CDD:278470 22/120 (18%)
PTPc 1272..1525 CDD:214550
PTPc 1298..1525 CDD:238006
XB5906919XP_002939016.3 PLN02820 63..578 CDD:178415 89/470 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001181
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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