DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and XB22169588

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_002933047.2 Gene:XB22169588 / 100493594 XenbaseID:XB-GENE-22169589 Length:301 Species:Xenopus tropicalis


Alignment Length:293 Identity:134/293 - (45%)
Similarity:178/293 - (60%) Gaps:14/293 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly  1249 NRPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRF 1313
            :|.:.:.:|.|.:.:...|.:..|.:||:||..||.||....|:.|.|..|||:.:||||||::.
 Frog     7 SRAMPVCSFQEMFYMKQKDENNIFIKEFKELTDVGNDQSKEAAETPANAMKNRYAHILPYDHTQV 71

  Fly  1314 KLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGR 1378
            ||..:|.:..|.||||||:||....:|:|.||.||.:|..|||||.||...|.|||||.|.|:|:
 Frog    72 KLSLIDGNLDSGYINANYIPGFGDGKEYIATQAPLPATFVDFWRMIWEQRVRIIVMLTVCEEQGK 136

  Fly  1379 EKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEFMLCR----GSEQRILRHFHFTTWPDFGV 1439
            ..||||||.|||.  ||.|.|..:::.|..||.:..|.:.:    .:..|.:...|:|||||.||
 Frog   137 VLCDQYWPADTVS--YGLIAVHKVSELHSKDWTIRHFTIQKINNADTSARSIYQLHYTTWPDRGV 199

  Fly  1440 PNPPQTLVRFVRAFRDRIGA--EQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYA 1502
            |..|.:||.||...|:.:.|  :..|.|:||||||||:||||.||..|||:|....:|||..|:.
 Frog   200 PINPVSLVTFVEFVREHVQAVKDSGPTVLHCSAGVGRTGTFIALDVALQQLNAGQCIDIFQTVHK 264

  Fly  1503 MRKERVWMVQTEQQYICIHQCLLAVLEGKENIV 1535
            ||..|..|:|||:|||.:|.|:|      |.||
 Frog   265 MRLSRYLMLQTEEQYIFVHYCIL------EKIV 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470
fn3 961..1043 CDD:278470
PTPc 1272..1525 CDD:214550 126/258 (49%)
PTPc 1298..1525 CDD:238006 114/232 (49%)
XB22169588XP_002933047.2 PTPc 30..288 CDD:214550 127/265 (48%)
PTPc 57..288 CDD:238006 115/238 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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