DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptprbl

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_021326526.1 Gene:ptprbl / 100333658 ZFINID:ZDB-GENE-130522-4 Length:931 Species:Danio rerio


Alignment Length:1088 Identity:275/1088 - (25%)
Similarity:426/1088 - (39%) Gaps:264/1088 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 LLVLWQPPYPAGIYTHYKVSIEPPDANDSVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTMSE 297
            |.|.|:.  ..|....|.||:...:.....|.|.|..     .:..||.||.||.||||: |...
Zfish    26 LSVSWRA--AEGDVDSYWVSLRDRERTVHTLTVSKVS-----TECVFKSLVSGRLYNISI-TSRS 82

  Fly   298 DEISLPTTAQYRTVPLRPLNVTFDRDFITSNSFRVLWEAPKGISEFDKYQVSVATT---RRQSTV 359
            .|....|..|.||.|...||.|... .......:|.|...:|  :||.|.||:...   .:..||
Zfish    83 GEFE
NHTAVQERTQPSPVLNPTATH-MAEEQLLKVYWRHAEG--DFDYYHVSIKHNNIFHQNRTV 144

  Fly   360 PRSNEPVAFFDFRDIAEPGKTFNVIVKTVSGKVTSWPATGDVTLRPLPVRNLRSINDDKTNTMII 424
            |:|.....|...    .||:.:.|.|.|.|||..|..:|...|| |..|:|| |:.|..|..:::
Zfish   145 PKSQNEYVFSGL----VPGRLYMVTVSTWSGKYES
SVSTHGSTL-PARVQNL-SLADSGTEDLLV 203

  Fly   425 TWEADPASTQD-EYRIVYHELETFNGDTSTLTTDRTRFTLESLLPGRNYSLSVQAVS-------- 480
            ||.:.|..... |.::::::::.|  ...|||:..|::.|.||.|||.|.:.|...|        
Zfish   204 TWASAPGDVDHYEVQLLFNDMKVF--PPITLTSSTTQYLLSSLTPGRLYKILVSTFSGPNLRVQF 266

  Fly   481 ---KKMESNETSIFVVTRPSSPIIEDLKSIRMGLNISW---KSDVNSKQEQYEVLYSRNGTSDLR 539
               :.:.|...:|.:.....|          ..|.:||   :.||    ::|.|..|..      
Zfish   267 LRGRTVPSTVKNIHISNEGQS----------SSLRVSWTPGQGDV----DRYTVSLSPG------ 311

  Fly   540 TQKTKESRLVIK--------NLQPGAGYELKVFAVSHDLRSEPHAYFQAVYPNPPRNMTIETVRS 596
                 :.|.|.|        :||||..|.:.|.::|..|.:...|..:.| |:|...:.:|..||
Zfish   312 -----QERFVPKHVNEVSFQHLQPGQQYNITVTSISGSLINNSTATGRTV-PSPVSALQLEEQRS 370

  Fly   597 NSVL-VHWSPPESGEFTEYSIRYRTDSEQQWVRLPSVRSTEAD-----ITDMTKGEKYTIQVNTV 655
            .|.| |.|   ::|:....|.|.:...|:.  .|.|..||.|.     .|.:|.|:.|.:.:..:
Zfish   371 TSTLSVFW---QAGQGVFDSFRLQLLDERG--TLVSNISTAAQAIQHTFTHLTPGKPYRVLIRAL 430

  Fly   656 SFGVESPVPQEVNTTVPPNPVSNIIQLVD-SRNITLEWPKPEGRVESYILKWWPSDNPGRVQTKN 719
            |.||.|. ..||.....|..||::..:.: :.:::..|..|.|..:.:.:..:..|       :.
Zfish   431 SGGVSSN-DVEVEGRTCPATVSDLSVISNTTTSLSFRWAPPVGEFDGFDVLLYDED-------ER 487

  Fly   720 VSENKSA--DDLSTVRVLIGELMPGVQYKFDIQTTSYGILSGITSLYPRTMPLIQSDVVVANGEK 782
            :.:.||.  .|.|.:     .|.||:.||..|.|.| |..:..||::.||:|   :.|...:.:.
Zfish   488 LLDQKSGVMQDCSFL-----NLRPGLLYKVLIFTRS-GDQTNSTSIWARTVP---AAVTFLHADS 543

  Fly   783 EDERDTITLSYTPTPQSSSKFDIYRFSLGDAEIRDKEKLANDTDRKVTFTGLVPGRLYNITVWTV 847
            ....:::.||:.....:.|.:.:  ..|.....|..|:......|...|..||.||||...|.|.
Zfish   544 RRSSESLWLSWKQPAGAVSSYTL--LILNPDGTRTAEQSLGPDSRSHQFQSLVSGRLYQAVVLTH 606

  Fly   848 SGGVASLPIQRQDRLYPEPITQLHATNITDTEISLRWDLPKG-EYNDFDIAYLTADNLLAQNMTT 911
            ||.:.:: ....||..|:|........||:|.:.:.|..|:. :|:|||:.:...|:|       
Zfish   607 SGDLTNM-ATTSDRTDPKPPVSFSFGEITNTSLEITWSAPENTDYDDFDLQWSPRDHL------- 663

  Fly   912 RNEITISDLRPHRNYTFTVVVRSGTESSVLRSSSPLSASFTTNEAVPGRVERFHPTDVQPSEINF 976
                  |...|:.                    ||.||:                          
Zfish   664 ------SVFNPYH--------------------SPTSAN-------------------------- 676

  Fly   977 EWSLPSSEANGVIRQFSIAYTNINNLTDAGMQDFESEEAFGVIKNLKPGETYVFKIQAKTAIGFG 1041
                                                    .::|.:.||..|  .|..:|..|.|
Zfish   677 ----------------------------------------RILKGMHPGRQY--NISLRTVSGAG 699

  Fly  1042 PEREYRQTMPILAPPRPATQVVPTEVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIVAE-DDAKNA 1105
            ....  :.:.|..||.|..::....|..:.|||..:|..::|||.||.|:.:||::.| ||::..
Zfish   700 TNNP--RVLVISGPPLPMARIDENAVTITKSTILFQFNCSWFSDINGAVKFFTIVIIESDDSERQ 762

  Fly  1106 SGLE---MPSWLDVQSYSVWLPYQA------IDPYYPFENRS-VEDFTI----GTEN----CD-- 1150
            ...:   :||:||.:|.|....||.      .|     |::| .::|.:    |.|:    ||  
Zfish   763 QPQQVHPLPSYLDYRSNSSIKAYQTSFFRSHCD-----ESQSPAQEFRVQLGSGMESLGGRCDQK 822

  Fly  1151 ------NHKIGYCNGPLKSGTTYRVKVRAFT---GADK-------FTDTAYSFPIQTDQDNTS-L 1198
                  ..:..:|:||||..|.||:.|||||   ..|:       :|||..|.|:.|..:..| :
Zfish   823 TSTGGSQEQTAFCDGPLKPRTAYRLSVRAFTKLYDEDREEFLSPLYTDTYLSKPLLTHAEPLSGV 887

  Fly  1199 IVAITVPLTII--LVLLVTLLFYKRRRNNCRKTTKDSRAND---NMSL 1241
            |..::..|.:|  :|.|:.||.       ||:......|.:   .|||
Zfish   888 IEGVSAGLFLIATMVGLIVLLV-------CRQKVHKMSAQEPVVRMSL 928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470 22/70 (31%)
fn3 315..391 CDD:278470 22/78 (28%)
FN3 405..494 CDD:238020 27/100 (27%)
FN3 511..574 CDD:238020 19/73 (26%)
FN3 583..671 CDD:238020 28/93 (30%)
fn3 683..753 CDD:278470 15/72 (21%)
fn3 787..850 CDD:278470 17/62 (27%)
fn3 866..935 CDD:278470 14/69 (20%)
fn3 961..1043 CDD:278470 8/81 (10%)
PTPc 1272..1525 CDD:214550
PTPc 1298..1525 CDD:238006
ptprblXP_021326526.1 fn3 11..86 CDD:306538 22/67 (33%)
fn3 98..175 CDD:306538 24/83 (29%)
fn3 188..259 CDD:306538 23/73 (32%)
fn3 274..343 CDD:306538 20/93 (22%)
fn3 358..433 CDD:306538 22/79 (28%)
FN3 450..520 CDD:328772 18/82 (22%)
fn3 624..699 CDD:306538 25/175 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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