DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ephb1

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_017207747.1 Gene:ephb1 / 100333537 -ID:- Length:1011 Species:Danio rerio


Alignment Length:604 Identity:119/604 - (19%)
Similarity:203/604 - (33%) Gaps:160/604 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   875 ITDTEISLRWDLPKGEYNDFDIAYLTA---------------DNLLAQNM---TTRNEITISDLR 921
            :.:|.::|.|..|:......|:.|...               ||:..|..   .|.:.:.||:|.
Zfish   337 VNETSVTLEWHSPRETGGREDVTYNIVCKKCQADRRSCSHCDDNVEFQPRQLGLTESRVFISNLL 401

  Fly   922 PHRNYTFTVVVRSGTESSVLRSSSPLSASFTTNEAVPGRVERFHPTDVQPSEINFEWSLPSSEAN 986
            .|..|||.:...:|..:.....:..:|...|||:|.|..|...|........|...|..| .:.|
Zfish   402 AHTLYTFEIQAVNGVSNKSPYPAQHVSIDITTNQAAPSIVPIMHQVSSTMKSITLSWPQP-EQPN 465

  Fly   987 GVIRQFSIAYTNINNLTDAGMQDFESEEAFGVIKNLKPGETYVFKIQAKTAIGFGP--------- 1042
            |:|..:.:.|.. ..|::.......|:.....:..|:||..||.:::|:|..|||.         
Zfish   466 GIILDYELRYYE-KELSEVNSTQMRSQTNTARVDGLRPGTMYVMQVRARTVAGFGKYSSKMCFQT 529

  Fly  1043 ------EREYRQTMPILAPPRPATQVVPTEVYRSSSTIQIRFRKNY-----FSDQNGQVRMYTII 1096
                  :.|.|:.:|::|....|..|....:...|  |..|.::.|     :||:.........:
Zfish   530 LTDDDYKSELREQLPLIAGSAAAGVVFIVSLVAIS--IVCRRKRAYNKEAVYSDKLQHYSTGREL 592

  Fly  1097 VAEDDAKNA-SGLEMPSWLDVQSYSVWLPYQAIDPY-YPFENRSVEDFTIGTENCDNHKIGYCNG 1159
            ....|..|. :.:..|:........::     |||: |...|.:|.:|.                
Zfish   593 TLRPDLSNCHTPMGCPTLPGSPGMKIY-----IDPFTYEDPNEAVREFA---------------- 636

  Fly  1160 PLKSGTTYRVKVRAFTGADKFTDTAYSFPIQTDQDNTSLIVAITVPLTIILVLLVTLLFYKRRRN 1224
              |......||:....||.:|.: .|...::. .....|.|||..        |......|:||:
Zfish   637 --KEIDVSTVKIEEVIGAGEFGE-VYKGRLKL-PGKRELYVAIKT--------LKAGYSEKQRRD 689

  Fly  1225 NCRKTT-KDSRANDNMSLPDSVIEQNRPILI-KNFAEHYRLMS--ADSDFRFS------------ 1273
            ...:.: .....:.|:...:.|:.::||::| ..|.|:..|.|  ..:|.:|:            
Zfish   690 FLSEASIMGQFDHPNIIRLEGVVTKSRPVMIVTEFMENGALDSFLRQNDGQFTVIQLVGMLRGIA 754

  Fly  1274 ---EEFEELKHVGRDQP-----------CTFADLPCNR-------------------------PK 1299
               :...|:.:|.||..           |..:|...:|                         |:
Zfish   755 AGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQEDTSDPTYTSSLGGKIPVRWTSPE 819

  Fly  1300 ----NRFTN--------ILPYDHSRFKLQPVDDDEGSDYINA-----NYVPGHNSPREFIVTQGP 1347
                .:||:        |:.::...|..:|..|....|.|||     ...|..:.|.       .
Zfish   820 AIAYRKFTSASDVWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPMDCPT-------A 877

  Fly  1348 LHSTRDDFWRMCWESNSRA 1366
            ||....|    ||:.:..|
Zfish   878 LHQLMLD----CWQKDRNA 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020
FN3 583..671 CDD:238020
fn3 683..753 CDD:278470
fn3 787..850 CDD:278470
fn3 866..935 CDD:278470 17/77 (22%)
fn3 961..1043 CDD:278470 21/96 (22%)
PTPc 1272..1525 CDD:214550 27/163 (17%)
PTPc 1298..1525 CDD:238006 19/86 (22%)
ephb1XP_017207747.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11636
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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