DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptprb

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:NP_001131088.2 Gene:ptprb / 100192375 XenbaseID:XB-GENE-991728 Length:2326 Species:Xenopus tropicalis


Alignment Length:1591 Identity:473/1591 - (29%)
Similarity:743/1591 - (46%) Gaps:239/1591 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 PNTTIASREIGDEIQFSRALPGTKYNFWLYYTNFTHHDWLTWTVTIT---------------TAP 123
            |...:.|:| ..|..|:....|.||                 ..|:|               |.|
 Frog   833 PVNKVLSKE-AKEFTFNHLAQGRKY-----------------IATVTSISGDLSSRASVEGRTVP 879

  Fly   124 DPPSNLSVQVRSGKNAIIL-W--SPPTQGSYTAFKI--KVLGLSEASSSYNRTFQVNDNTFQHSV 183
            ...:||:|:.:...:::.. |  :|....||....|  |::..:|..|:     ::|..:| ||:
 Frog   880 AQVTNLNVENQGTTSSLHADWTKAPGDVDSYQVLLIHEKIVIKNETVSN-----EINKYSF-HSL 938

  Fly   184 KELTPGATYQVQAYTIYDGKESVAYTSRNFTTKPNTPGKFIVWFRNETTLLVLWQPPYPAGIYTH 248
            |   ||..|.|...|:..|..|....|...|...:.....|..|.....|.:.|||  .||....
 Frog   939 K---PGGLYSVVVTTVSGGISSRQTVSEGRTVPSSVNRVTINNFGRSDYLSISWQP--AAGDVDI 998

  Fly   249 YKVSIEPPDANDSVLYVEKEGEPPGPAQAAFKGLVPGRAYNISVQTMS--------EDEISLPTT 305
            |.|::...:.....|.:.|...     :.:|..|..||.||::|.|.|        ..|.::|:.
 Frog   999 YFVTLSHQNNILPSLAISKSVN-----ECSFSSLTAGRLYNVTVTTKSGKYENHSYSQEWTVPSA 1058

  Fly   306 AQYRTVPLRPLNVTFDRDFITSNSFRVLWEAPKGISEFDKYQVSVATTRRQSTVPRSNEPVAFFD 370
            .|...|     |.....|::.::..|       .:.:||.|||         |:..:|:   |..
 Frog  1059 VQGLAV-----NNAARSDYLKASWLR-------AVGDFDIYQV---------TIKNNND---FIQ 1099

  Fly   371 FRDIAE-----------PGKTFNVIVKTVSGKVTSWPATGDVTLRPLP--VRNLRSINDDKTNTM 422
            .:|:.:           ||:.:::.|.|.||   ::.|:...:.|..|  |:.| ::.:..:..:
 Frog  1100 IKDVTKTENECVFTNLVPGRLYSITVMTKSG---NYKASAMASGRTFPEAVKKL-TLAERSSEEL 1160

  Fly   423 IITW-EADPASTQDEYRIVYHELETFNGDTSTLTTDRTRFTLESLLPGRNYSLSVQAVSKKMESN 486
            .:|| .||......|.::::::::.|...|...|.|..:||  ||.|||.|.:.|...|.:.   
 Frog  1161 HVTWSRADGDVDHYEIQLLFNDMKVFPPITLNNTADEYKFT--SLTPGRLYKIVVLTFSGEA--- 1220

  Fly   487 ETSIFV--VTRPSSPIIEDLKSIRM-------GLNISWK---SDVNSKQEQYEV-LYSRNGTSDL 538
            :.::||  :|.||:     :|:|.:       .|.::|.   .||:|    |.| ::..|.....
 Frog  1221 QRAMFVEALTVPST-----VKNIHISPNGMTNSLKVNWTPGGGDVDS----YTVSIFHHNSPIGS 1276

  Fly   539 RTQKTKESRLVIKNLQPGAGYELKVFAVSHDLRSEPHAYFQAVYPNPPRNMTIETVRSNSVL-VH 602
            .|..........:||.||..|::.|...|..|.....::.:.: |....:::.:...|:.:| |.
 Frog  1277 HTTSKHIFEHTFQNLNPGELYKVDVQTNSGSLHKSLESFGRTI-PATVHSLSADNAYSSHLLIVS 1340

  Fly   603 WSPPESGEFTEYSIRYRTDSEQQWVRLPS----VRSTEADITDMTKGEKYTIQVNTVSFGVESPV 663
            |...: |....|.|...:|   ..:.:.:    :.:......|:..|:||.|||.|||.|:.|..
 Frog  1341 WQSAK-GVTDRYDILLLSD---HGIVITNKSVPIMAKSHKFEDLVPGKKYRIQVFTVSGGLFSAA 1401

  Fly   664 PQEVNTTVPPNPVSNI-IQLVDSRNITLEWPKPEGRVESYILKWWPSDNPGRVQTKNVSENKSAD 727
            .:....|||. .||:: |....:.:::..|...||.::||.:..:..||       ::.:.||.:
 Frog  1402 VETEGQTVPA-AVSDVKITGNSTDSLSFTWNSSEGELDSYGIFLYNPDN-------SLHDRKSGN 1458

  Fly   728 -DLSTVRVLIGELMPGVQYKFDIQTTSYGILSGITSLYPRTMPLIQSDVVVANGEKEDERDTITL 791
             ||.  ......|:||..||..|.|.| |.|:..:|::.||:|...|.:.|:|....:     :|
 Frog  1459 PDLR--HCSFQGLLPGRLYKMVIVTHS-GSLTNESSIHGRTVPAPVSSLQVSNRNTSE-----SL 1515

  Fly   792 SYTPTPQSSSKFDIYRFSLGDAEIRDKEKLANDTDRKVTFTGLVPGRLYNITVWTVSGGVASLPI 856
            .:|..| :....|||...|.:....:|||:.:....:..|..|||||||.:.::|.||.:.: ..
 Frog  1516 WFTWAP-ALGDVDIYELILYNPNGTEKEKIQDKDLTESHFQNLVPGRLYTLVIFTHSGDLFN-KA 1578

  Fly   857 QRQDRLYPEPITQLHATNITDTEISLRWDLPKG--EYNDFDIAYLTADNLLAQNM----TTRNEI 915
            ....|..|:|...:...::....:|:.|..|..  :|:||::.:...|.|:..|.    .::..|
 Frog  1579 TAVGRTAPQPPNSVSFADVKINSLSIMWLGPPDWTDYDDFELQWSPKDLLVVVNPYSIGRSKGRI 1643

  Fly   916 TISDLRPHRNYTFTVVVRSGTESSVLRSSSPLSASFTTNEAVPGRVERFHPTDVQPSEINFEWSL 980
             |:.|.|.|.|||.|...||.....|   ||  |.|.|....|.::...|......:.|:..|:.
 Frog  1644 -INGLYPGRQYTFGVQSVSGNTGKTL---SP--AIFGTVRTKPDKIHHLHCRPQTSTAISCSWTP 1702

  Fly   981 PSSEANGVIRQFSIAYTNINNLTDAGM-QDFESEEAFGVIKNLKPGETYVFKIQAKTAIGFGPER 1044
            |.|:.:|    :|:.... |...|... :..|.:::...|..|.|.:.||..|:..:|.......
 Frog  1703 PDSDFDG----YSVECRR-NGSDDVEFSKRIEKDKSSITISTLVPHKRYVVSIKVHSADMTSQVI 1762

  Fly  1045 EYRQTMPILAPPRP--ATQVVPTEVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIVAE----DDAK 1103
            |......|..||.|  ..:|...:.:.|.|:|..||..::|||.||.|:.:|:||:|    |:.:
 Frog  1763 EDSAITMIDRPPPPPLLIRVNKKDTFISKSSIHFRFNCSWFSDTNGAVKYFTVIVSEADGNDNQR 1827

  Fly  1104 NASGLEMPSWLDVQSYSVWLPYQAIDPYYPFENRSVEDFTI---------GTE----NCDNHKIG 1155
            ..:.|.:||:.|.::......||.  .|:|.......|:.|         |.|    .||.::..
 Frog  1828 PEASLPLPSYADYKTNKSTKIYQT--SYFPSRCAENPDYNIQSYKIKLGTGMELLGGKCDQNENK 1890

  Fly  1156 YCNGPLKSGTTYRVKVRAFT----------GADKFTDTAYSFPIQTDQDNT-SLIVAITVPLTII 1209
            ||:|||...|:||:.|||||          ....::||.:|.||.|:.:.. .:|..::..:.:|
 Frog  1891 YCDGPLSPRTSYRISVRAFTQLFTEEMRTFPEPLYSDTFFSLPITTEAEPLFGVIEGVSGGMFVI 1955

  Fly  1210 LVLLV--TLLFYKRRRNNCRK----TTKDSRAND----------NMSLPDSVIEQNRPILIKNFA 1258
            ::::|  .||.|::::....:    ||..|...:          ::.:.|.:  .:||||...|.
 Frog  1956 IMIIVLTVLLIYRQKKKRVYEQDPMTTHLSSQIERIPSVHLNVGHIQIGDRI--SSRPILTAQFE 2018

  Fly  1259 EHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEG 1323
            ||:..:..||::..|.|:|.||..||||....|.||.||.|||::||||||.:|.||..||||..
 Frog  2019 EHFSKLQTDSNYLLSREYENLKDFGRDQSSDTALLPENRGKNRYSNILPYDSTRVKLANVDDDPC 2083

  Fly  1324 SDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPND 1388
            ||||||:|:||.|..||:|.|||||.:|:||||:|.||.|...|||:|:|.|:||.|||.|||.|
 Frog  2084 SDYINASYMPGINFRREYIATQGPLPATKDDFWKMVWEQNVHIIVMVTQCTERGRAKCDHYWPMD 2148

  Fly  1389 TVPVFYGDIKVQILNDSHYADWVMTEFMLCRGSE---QRILRHFHFTTWPDFGVPNPPQTLVRFV 1450
            ....:|||:.||:|::|...:|.:.||.:|...:   .|::||||:|.|||.|||...|:|::||
 Frog  2149 QDSYYYGDLIVQMLSESVLPEWTIREFKICSEDQIDAPRLVRHFHYTVWPDHGVPETTQSLIQFV 2213

  Fly  1451 RAFRDRIGAE--QRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQT 1513
            |..||.|...  ..|.||||||||||:||||.|||:|||::|.|.|||||.|..:|..|::||||
 Frog  2214 RTVRDYINRTPGSGPTVVHCSAGVGRTGTFIVLDRMLQQVDTVDSVDIFGAVRDLRIHRMYMVQT 2278

  Fly  1514 EQQYICIHQCLLAVLEGKENIVGPAREMHDN 1544
            |.||:.::||:..||..::     .|...||
 Frog  2279 ECQYVYLYQCVRDVLRARK-----LRNEQDN 2304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 22/85 (26%)
fn3 220..304 CDD:278470 22/91 (24%)
fn3 315..391 CDD:278470 17/86 (20%)
FN3 405..494 CDD:238020 24/93 (26%)
FN3 511..574 CDD:238020 17/66 (26%)
FN3 583..671 CDD:238020 21/92 (23%)
fn3 683..753 CDD:278470 18/70 (26%)
fn3 787..850 CDD:278470 20/62 (32%)
fn3 866..935 CDD:278470 19/74 (26%)
fn3 961..1043 CDD:278470 17/82 (21%)
PTPc 1272..1525 CDD:214550 143/257 (56%)
PTPc 1298..1525 CDD:238006 129/231 (56%)
ptprbNP_001131088.2 Ricin_B_lectin <15..98 CDD:279046
ASFV_J13L <170..272 CDD:114299
fn3 437..520 CDD:278470
fn3 528..597 CDD:278470
fn3 613..690 CDD:278470
fn3 705..779 CDD:278470
fn3 793..872 CDD:278470 10/56 (18%)
fn3 881..954 CDD:278470 21/81 (26%)
fn3 981..1045 CDD:278470 19/70 (27%)
fn3 1057..1132 CDD:278470 20/101 (20%)
fn3 1146..1219 CDD:278470 21/75 (28%)
fn3 1233..1303 CDD:278470 18/78 (23%)
fn3 1326..1400 CDD:278470 19/77 (25%)
fn3 1412..1491 CDD:278470 24/88 (27%)
fn3 1500..1573 CDD:278470 23/78 (29%)
fn3 1588..1669 CDD:278470 22/84 (26%)
fn3 1681..1756 CDD:278470 16/79 (20%)
PTPc 2031..2289 CDD:214550 142/257 (55%)
PTPc 2058..2289 CDD:238006 128/230 (56%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 277 1.000 Domainoid score I1693
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2125
Inparanoid 1 1.050 532 1.000 Inparanoid score I1190
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 1 1.000 - - FOG0001181
OrthoInspector 1 1.000 - - otm48034
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4185
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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