DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp10D and ptpro

DIOPT Version :9

Sequence 1:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster
Sequence 2:XP_031753458.1 Gene:ptpro / 100135074 XenbaseID:XB-GENE-996931 Length:1201 Species:Xenopus tropicalis


Alignment Length:1511 Identity:356/1511 - (23%)
Similarity:556/1511 - (36%) Gaps:439/1511 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LTWTVTITTAPDPPSNLSVQVRSGKNAII-LWSPPTQGSYTAFKIKVLGLS--------EASSS- 167
            |||.:.|....| .|...|.:......:| |.||....:.:.:.:|:.|.|        |.:|: 
 Frog     5 LTWLLIIIFLQD-GSTFQVALTQDNCLVISLESPDVLSTKSVYLVKITGESKNYFFQFEEFNSTL 68

  Fly   168 -----YNRTFQ----------VNDNTFQHSVKELTPGATYQVQAYTIYDGKESVAYTSRNFTTKP 217
                 :|.|:.          ||.|....|:|.:|                         ..|||
 Frog    69 PSPLVFNATYHGLYYIITLIAVNSNMASRSIKSIT-------------------------VLTKP 108

  Fly   218 NTPGKFIVW-FRNETTLLVLWQPPYPA--GIYTHYKVSIEPPDANDSVLYVEKEGEPPGPAQAAF 279
            ......::. :|......|:::..||.  .:::...:|........:|||.:           .|
 Frog   109 LPVSHVVIHDYRPSPQTGVVFEVQYPEKFNVFSRVNISYWEGSHFRTVLYKD-----------FF 162

  Fly   280 KG------LVPGRAY-NISVQTMSEDEISLPTTAQY----------RTVPLRPLNVTFDRDFITS 327
            ||      .:||..| ||::|.:||...:..|..:|          ||||..|.|::.  ..:..
 Frog   163 KGKTVFNHWLPGTCYGNITLQLVSEASFNKSTLVEYSGVGHRPQFHRTVPFPPRNISV--QILRL 225

  Fly   328 N-SFRVLWEAPKGISEFDKYQVSVATTRRQSTVPRSNEPVAFFDFRDIAEPGKTFNVIVKTVSGK 391
            | ||..|...........|||        ..|.|.|:..:    |.|..| ..||..:..:...:
 Frog   226 NLSFTDLLNGKNNEDSLKKYQ--------DFTEPESSAEM----FEDQNE-RSTFPSLYNSTDPQ 277

  Fly   392 VTSWPATGDVTLRPLPVRNLRSINDDKTNTMIITWEADPASTQDEYRIVYHELETFNGDTSTLTT 456
            .                         |.||:       |.:|.          :.|.....||..
 Frog   278 Y-------------------------KNNTL-------PEATS----------QPFWWANETLPP 300

  Fly   457 DRTRFTLESLLPGRNYSLSVQAVSKKMESNETSIFVVTRPSSPIIEDLKSIRMGLNISW-KSDVN 520
            |...| :..:||  :|.                    ..|....:.:..|:...|.||| .....
 Frog   301 DTDGF-VNGVLP--DYE--------------------DPPVGSSVPNSSSLSFKLLISWLPPKAP 342

  Fly   521 SKQEQYEVLYSRNGTSDLRTQKTKESRLVIKNLQPGAGYELKVFAVSH----DLRSEPHAYFQAV 581
            :..:.:.:...|:|.:...|...:.:...:..::....|.:::.:.|.    ::|....|...:.
 Frog   343 TAYDGFNIYIFRDGNASAVTAVDESAHEFVAEMREPGKYWVEITSFSSTGSCEIRESSAAKAISF 407

  Fly   582 YPNP-----------PRNMTIETVRSNSVLVHWSP-PESGEFTE-YSIRYRTDSEQQWVRL---- 629
            |.:|           ||::.::.|.|.:.:|.|:| |.:..... .|:......|.|  ||    
 Frog   408 YISPAGDWLEEMTEKPRDVAVKIVNSTTAVVSWAPSPNTSPIVSVVSLTCPKQKESQ--RLEKHY 470

  Fly   630 -PSVRSTEADITDMTKGEKYTIQVNTVSFGVESPVPQEVNTTV-PPNPVSNIIQLVDSRNITLEW 692
             ..|.|:...|.::..|.:|.:.|......:..|..:.|...: ||.....::..:....:.|.|
 Frog   471 CKEVNSSSNIIENLVPGAQYKVAVYFQRSPLIGPPSKAVLFAIDPPGVTDLLLYPLGPSAVVLGW 535

  Fly   693 PKPE-GRVESYILKWWPSDNPGRVQTKNVSENKSADDLS-TVRVLIGELMPGVQYKFDIQTTSYG 755
            .:|. |....|:::.: ..||..:.::.....:.|..:| |..|.:..|:|...|||.:...::|
 Frog   536 RRPYLGAFRKYMVEMF-YFNPAAMSSEWTPYYEVAATVSLTASVKVTHLLPAWYYKFRVTMVTWG 599

  Fly   756 ---------ILSGITSLYPRTMPLIQSDVVVANGEKEDERDTITLSYTPTPQSSSKFDIYRFSLG 811
                     .:|.:|:   ...|.|.| |..:||...     ||.:|     ....||:....:.
 Frog   600 EPQLSCCDTTVSFVTA---PVAPQITS-VEYSNGLLH-----ITWAY-----GDGAFDLSHSRIL 650

  Fly   812 DAEI--RDKEKLANDTDRKVTFT--GLVPGRLYNITVWTVSGGVASLPIQRQDRLYPEPITQLHA 872
            ..::  ..|.::.....|..|.|  .:.||.:|||||...:...::..:.....|.|.||..|.|
 Frog   651 HWQVIAEGKNRIKKSVSRSGTATVISVPPGDIYNITVTACTERSSNTSLPHIVTLDPAPIRTLFA 715

  Fly   873 TNITDTEISLRWDLPKGEYNDFDIAYLTADNLLAQNMTTRNE-------------ITISDLRPHR 924
            .|.|.|.::|.| :.:|..:.|:::       ..||.....|             :|||.|:|..
 Frog   716 VNKTQTSVTLLW-VEEGIADYFEVS-------CWQNREPGAETNQKDPVAVFSHIVTISSLQPDT 772

  Fly   925 NYTFTVVVRSGTESSVLRSSSPLSASFTTNEAVPGRVERFHPTDVQPSEINFEWSLPSSEANGVI 989
            :|..:|     |..|....|:|...:.:|..|                |:|     |:.....|:
 Frog   773 SYNCSV-----TSISHRTPSAPTFLTVSTLVA----------------ELN-----PNVVVISVL 811

  Fly   990 RQFSIAYTNINNLTDAGMQDFESEEAFGVIKNLKPGETYVFKIQAKTAIGFGPEREYRQTMPILA 1054
            ...|:....:..|                                                    
 Frog   812 ALLSVLLIALLFL---------------------------------------------------- 824

  Fly  1055 PPRPATQVVPTEVYRSSSTIQIRFRKNYFSDQNGQVRMYTIIVAEDDAKNASGLEMPSWLDVQSY 1119
                             ..|.:|.:....|...|..........|.|.|                
 Frog   825 -----------------MLIVLRRKHLQMSRDCGAGTFVNFASLEKDGK---------------- 856

  Fly  1120 SVWLPYQAIDPYYPFENRSVEDFTIGTENCDNHKIGYCNGPLKSGTTYRVKVRAFTGADKFTDTA 1184
               |||.        ..||:..|.....:|                             .:||..
 Frog   857 ---LPYN--------WRRSIFAFLTVLPSC-----------------------------LWTDYL 881

  Fly  1185 YSFPIQTDQDNTSLIVAITVPLTIILVLLVTLLFYKRRRNNCRKTTKDSRANDNMSLPDSVIEQN 1249
            .:|.|.....|.                     ..||:..|                        
 Frog   882 LAFYINPWNKNG---------------------LKKRKLTN------------------------ 901

  Fly  1250 RPILIKNFAEHYRLMSADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFK 1314
             |:.:.:|..:.:.||.|||::||.:|||||.||.|.|...||||.||.|||:|||||||.||.|
 Frog   902 -PVQLDDFDLYIKEMSKDSDYKFSLQFEELKMVGLDIPHFAADLPSNRGKNRYTNILPYDCSRVK 965

  Fly  1315 LQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGRE 1379
            |..::.|||:|||||||:||:::.:|:|.|||||..||:|||:|..:...:.|||||:|.||.|.
 Frog   966 LISLEADEGADYINANYIPGYSAAQEYIATQGPLPETRNDFWKMILQQKCQVIVMLTQCNEKRRI 1030

  Fly  1380 KCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTEFMLCRGSEQRILRHFHFTTWPDFGVP--NP 1442
            |||.|||....||.||||.|::.::...:||....|.:....|.:.:.||:||.|||.|||  |.
 Frog  1031 KCDHYWPFTPEPVNYGDITVEMASEEEQSDWAQRVFRVSYADETQCVTHFNFTAWPDHGVPTVNA 1095

  Fly  1443 PQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKER 1507
            .:::::||:..|.:....:.|:.|||||||||:||||.||.::|.|...::|||.|:|..:|..|
 Frog  1096 AESVLQFVQVVRQKALKSKGPVTVHCSAGVGRTGTFIALDWLMQHIRDHEFVDILGLVSELRSHR 1160

  Fly  1508 VWMVQTEQQYICIHQC 1523
            :.|||||:|::.||||
 Frog  1161 MSMVQTEEQFVFIHQC 1176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp10DNP_996413.2 fn3 124..205 CDD:278470 20/105 (19%)
fn3 220..304 CDD:278470 19/93 (20%)
fn3 315..391 CDD:278470 17/76 (22%)
FN3 405..494 CDD:238020 13/88 (15%)
FN3 511..574 CDD:238020 10/67 (15%)
FN3 583..671 CDD:238020 22/105 (21%)
fn3 683..753 CDD:278470 16/71 (23%)
fn3 787..850 CDD:278470 16/66 (24%)
fn3 866..935 CDD:278470 21/81 (26%)
fn3 961..1043 CDD:278470 6/81 (7%)
PTPc 1272..1525 CDD:214550 131/254 (52%)
PTPc 1298..1525 CDD:238006 114/228 (50%)
ptproXP_031753458.1 fn3 422..506 CDD:394996 20/85 (24%)
FN3 515..601 CDD:238020 19/86 (22%)
fn3 709..790 CDD:394996 24/93 (26%)
R-PTPc-O 936..1180 CDD:350462 122/241 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D16347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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