Sequence 1: | NP_001285132.1 | Gene: | Met / 32114 | FlyBaseID: | FBgn0002723 | Length: | 716 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_114010.1 | Gene: | Ncoa2 / 83724 | RGDID: | 620108 | Length: | 1465 | Species: | Rattus norvegicus |
Alignment Length: | 928 | Identity: | 168/928 - (18%) |
---|---|---|---|
Similarity: | 299/928 - (32%) | Gaps: | 289/928 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 SGSG-SSSDPAN-------------GREARNLAEKQRRDKLNASIQELATMV----PHAAESSRR 72
Fly 73 LDKTAVLRFATHGLRLQYVFGKSASR---RRKKTGLKGTGMSASPVGDLPNPSLHLTDTLMQLLD 134
Fly 135 CCFLTLTCSGQIVLVSTSVEQLLGHCQSDLYGQNLLQITHPDDQDLLRQQLIPRDIETLFYQHQH 199
Fly 200 HQQQGHNPQQHSTSTSASTSGSDLEEEEMETEEHRLGRQQGEA-------------DDDEDHP-- 249
Fly 250 ---YNRRTPSPRRMA--------------------HLATIDDRLR-----MDRRCFTVRLARAST 286
Fly 287 RAE------ATRHYERVKIDGC-------FRRSDSSLTGGAAANYPIVSQ------------LIR 326
Fly 327 RSRNNNMLAAAAAVAAEAATVPPQHDA--IAQAALHGISGNDIVL----------------VAMA 373
Fly 374 R-----------------------VLREERPPEETEG----------------TVGLTIYRQPEP 399
Fly 400 YQL----EYHT----------RHLIDGSIIDCDQRIG---------------LVAGYMKDEVRNL 435
Fly 436 SPFCFMHLDDVRWVIVALRQMYDCNSDYGE-----------SCYRLLSRNGRFIYLHTKGFLEVD 489
Fly 490 RGSNKVHSFLCVNTLLDEEAGRQK-VQEMKEKFSTIIKAEMPT------QSSSPDLPA-----SQ 542
Fly 543 APQQLERIVLYLIENLQKSVDSAE-TVGGQGMESLMDDGYSSPANTLTLEELAPSP--------- 597
Fly 598 ----------------TPAL----ALVPPAPSSVKSSISKSVSVVNVTAARKFQQEHQKQRERD- 641
Fly 642 -REQLKERTNSTQGVIRQLSSCLSE----AETAS----CILSPASSLSASEAPDTPDPHSNTSPP 697
Fly 698 PSLHT----RPSVLHRTL 711 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Met | NP_001285132.1 | HLH | 38..87 | CDD:238036 | 12/52 (23%) |
PAS | 137..>186 | CDD:238075 | 13/48 (27%) | ||
PAS_11 | 403..510 | CDD:291273 | 18/142 (13%) | ||
Ncoa2 | NP_114010.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..40 | 9/37 (24%) | |
HLH | 35..88 | CDD:197674 | 13/52 (25%) | ||
PAS | 119..215 | CDD:279347 | 23/101 (23%) | ||
PAS | 123..213 | CDD:238075 | 22/95 (23%) | ||
PAS_11 | 268..378 | CDD:291273 | 20/113 (18%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 449..528 | 7/78 (9%) | |||
NCOA_u2 | 463..587 | CDD:293270 | 16/131 (12%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 547..741 | 34/211 (16%) | |||
SRC-1 | 640..709 | CDD:285981 | 13/68 (19%) | ||
LXXLL motif 1 | 641..645 | 1/3 (33%) | |||
LXXLL motif 2 | 690..694 | 0/3 (0%) | |||
CASP8AP2-binding | 691..743 | 11/51 (22%) | |||
Interaction with ARNTL. /evidence=ECO:0000250|UniProtKB:Q61026 | 730..1121 | 36/165 (22%) | |||
DUF4927 | 731..816 | CDD:292896 | 16/90 (18%) | ||
LXXLL motif 3 | 745..749 | 0/3 (0%) | |||
LXXLL motif 4 | 878..882 | 2/3 (67%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1052..1075 | ||||
Nuc_rec_co-act | 1071..1116 | CDD:285967 | |||
LLXXLXXXL motif | 1079..1087 | ||||
DUF1518 | 1281..1338 | CDD:284808 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1311..1330 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |