DRSC/TRiP Functional Genomics Resources

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Protein Alignment Met and hif1aa

DIOPT Version :10

Sequence 1:NP_511126.2 Gene:Met / 32114 FlyBaseID:FBgn0002723 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001295488.1 Gene:hif1aa / 797150 ZFINID:ZDB-GENE-080917-55 Length:717 Species:Danio rerio


Alignment Length:755 Identity:146/755 - (19%)
Similarity:234/755 - (30%) Gaps:280/755 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 REARNLAEKQRRDKLNASIQELATMVPHAAESSRRLDKTAVLRFATHGLRLQYVFGKSASRRRKK 102
            :|....|.:.||.|.:....||:..:|.....:..|||.:|:|.|...|||:.:.......:...
Zfish    17 KEKSRDAARCRRGKESEVFYELSRELPLPHSVTSNLDKASVMRLALSYLRLRKLLNSDVLEKETA 81

  Fly   103 TGLKGTGMSASPVGDLPNPSLHLTDTLMQLLDCCFLTLTCSGQIVLVSTSVEQLLGHCQSDLYGQ 167
            ...:..|                  :.::.||...|.|:..|.||.:|.:|.:.||..|.:|.|.
Zfish    82 LDTQWNG------------------SFLKALDGFLLVLSADGDIVYLSENVSKCLGLPQIELTGH 128

  Fly   168 NLLQITHPDDQDLLRQQLIPRDIETLFYQHQHHQQQGHNPQQHSTSTSASTSGSDLEEEEMETEE 232
            ::.:.|||.|.:.||:.|                                              .
Zfish   129 SVFEFTHPCDHEELREML----------------------------------------------A 147

  Fly   233 HRLGRQQGEADDDEDHPYNRRTPSPRRMAHLATIDDRLRMDRRCFTVRLARASTRAEATRHYERV 297
            ||.|..:...|.:.:                           |.|.:|:.               
Zfish   148 HRFGLSKKSKDQNTN---------------------------RSFLLRMK--------------- 170

  Fly   298 KIDGCFRRSDSSLTGGAAANYPIVSQLIRRSRNNNMLAAAAAVAAEAATVPPQHDAIAQAALHGI 362
                |                    .|..|.|..|:.:|:..|..            ....:|..
Zfish   171 ----C--------------------TLTSRGRTVNVKSASWKVLR------------CSGRIHTA 199

  Fly   363 SGNDIVLVAMARVLREERPPEETEGTVGLTIYRQ-PEPYQLE-------YHTRHLIDGSIIDCDQ 419
            .|          |.:|....:.|..|..:.|... |.|..:|       :.:||.:|.....||:
Zfish   200 DG----------VEKEVCEEKNTCSTYLVLICESIPHPANIEAPLDSRTFLSRHTLDMRFTYCDE 254

  Fly   420 RIGLVAGYMKDEVRNLSPFCFMHLDDVRWVIVALRQMYDCNSDY-----------GESC---YRL 470
            ||..:.|:..::|...|.:.:.|..|               ||:           |:.|   |||
Zfish   255 RITELLGFDPEDVLQHSVYEYYHALD---------------SDHMTKTHHSLFVKGQVCTGQYRL 304

  Fly   471 LSRNGRFIYLHTKGFLEVDRGSNKVHSFLCVNTLLDEEAGRQKVQEMKEKFSTIIK--------- 526
            |::.|.|::..|:..:..:..:::....:|||.:|......:::..:::..||.||         
Zfish   305 LAKAGGFVWAETQATVIYNSKNSQAQCVVCVNYILSGIEQPKQILSLQQTNSTKIKQEEHQEEVE 369

  Fly   527 ---AEMPTQSSSPDLPASQAPQQLERIVLYLIENLQKSVDSAETVGGQGMESLMDDGYSSPANTL 588
               ||:..:....|....:..|.:.:      .|..|....|.||             :.|..||
Zfish   370 VTMAELKEEEKEMDKEDEECVQPVVQ------HNSLKGETEALTV-------------ADPVLTL 415

  Fly   589 TLEELAPSPTPALALVP-----PAPSS----VKSSISKSVSVVNVTAAR---------KFQQEHQ 635
            .: .:..|....|..:|     ..|||    ..|.:|...|.:|...|.         .|||...
Zfish   416 DI-NITDSAISVLTEIPLYNDVMLPSSDVLLPLSPLSPPCSSLNDDEASTGHLQHDQFPFQQSSD 479

  Fly   636 KQRER-----DRE---QLK----------ERTNSTQGV---IRQLSSCLS-----EAETASCI-- 672
            ..|.:     |.|   |||          :..:.||||   :..|:..:.     :..|.|.:  
Zfish   480 SSRSQVDLPVDSELCDQLKPDHVEKHFSMDIESKTQGVGLDLEMLAPYIPMDDDFQLRTVSPVRP 544

  Fly   673 --LSPASSLSASEAPDTPDPHSNTSP------PPSLHTRP 704
              .||.|.|..     ||...:.|||      |.||...|
Zfish   545 MCSSPCSGLDL-----TPSSSTQTSPALSAATPDSLSCDP 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetNP_511126.2 bHLH_PAS 38..89 CDD:381397 16/50 (32%)
PAS 137..>186 CDD:238075 18/48 (38%)
PAS_11 401..510 CDD:464214 28/129 (22%)
hif1aaNP_001295488.1 bHLH_SF 11..79 CDD:469605 17/61 (28%)
PAS 85..150 CDD:214512 23/128 (18%)
PAS 236..335 CDD:238075 23/113 (20%)
HIF-1 <519..541 CDD:463274 2/21 (10%)
HIF-1a_CTAD 683..716 CDD:430212
Blue background indicates that the domain is not in the aligned region.

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