DRSC/TRiP Functional Genomics Resources

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Protein Alignment Met and tgo

DIOPT Version :10

Sequence 1:NP_511126.2 Gene:Met / 32114 FlyBaseID:FBgn0002723 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_731308.1 Gene:tgo / 41084 FlyBaseID:FBgn0264075 Length:642 Species:Drosophila melanogaster


Alignment Length:752 Identity:161/752 - (21%)
Similarity:269/752 - (35%) Gaps:232/752 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DPANGREARNLA--------EKQRRDKLNASIQELATMVPHAAESSRRLDKTAVLRFATHGLRLQ 89
            |.||.::....|        |::||:|:.|.|.||:.|||..:..:|:.||..:||.|...::  
  Fly     2 DEANIQDKERFASRENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMK-- 64

  Fly    90 YVFGKSASRRRKKTGLKGTGMSASPVGDLPNPSLHLTD-----TLMQLLDCCFLTLTC-SGQIVL 148
                          .|:|||.::|.....|:   .|||     .:::..|.....::| ||:::.
  Fly    65 --------------ALRGTGNTSSDGTYKPS---FLTDQELKHLILEAADGFLFVVSCDSGRVIY 112

  Fly   149 VSTSVEQLLGHCQSDLYGQNLLQITHPDDQDLLRQQLIPRDIETLFYQHQHHQQQGHNPQQHSTS 213
            ||.||..:|.:.|||.||.:|.:..||||::.:|:||                           |
  Fly   113 VSDSVTPVLNYTQSDWYGTSLYEHIHPDDREKIREQL---------------------------S 150

  Fly   214 TSASTSGS---DLEEEEMETEEHRLGRQQGEADDDEDHPYNRRTPSPRRMAHLATIDDRLRMDRR 275
            |..|.:..   ||:...::.|.|:                     |..|::..|         ||
  Fly   151 TQESQNAGRILDLKSGTVKKEGHQ---------------------SSMRLSMGA---------RR 185

  Fly   276 CFTVRLARASTRAEATRHYERVKIDGCFRRSDSSLTGGAAANYPIVSQLIRRSRNNNMLAAAAAV 340
            .|..|:...:...|:                             :||..:.|.:..|.|.     
  Fly   186 GFICRMRVGNVNPES-----------------------------MVSGHLNRLKQRNSLG----- 216

  Fly   341 AAEAATVPPQHDAIAQAALH--GISGN--------------DI-------VLVAMARVLREERPP 382
                    |..|....|.:|  |...|              |:       .|||:.|:.......
  Fly   217 --------PSRDGTNYAVVHCTGYIKNWPPTDMFPNMHMERDVDDMSSHCCLVAIGRLQVTSTAA 273

  Fly   383 EETEGTVGLTIYRQPEPYQLEYHTRHLIDGSIIDCDQRIGLVAGYMKDEVRNLSPFCFMHLDDVR 447
            .:..|:..          |.|:.|||.:||.....|||:..:.||...|:.....:.|.|.:|..
  Fly   274 NDMSGSNN----------QSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQS 328

  Fly   448 WVIVALRQMYDCNSDYGESCYRLLSRNGRFIYLHTKGFLEVDRGSNKVHSFLCVNTL-------- 504
            .:..:..|:...........||..::|..:::|.|:.:..::..:::|...:|.|:.        
  Fly   329 HMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQAYAFLNPYTDEVEYIVCTNSSGKTMHGAP 393

  Fly   505 LDEEAGR--QKVQEMKEKFSTI----------IKAEM-PTQSSSPD------LPASQAPQQLERI 550
            ||..|..  ::||:.:::...:          .:.|: |..|::.|      :.|.|||...:: 
  Fly   394 LDAAAAHTPEQVQQQQQQEQHVYVQAAPGVDYARRELTPVGSATNDGMYQTHMLAMQAPTPQQQ- 457

  Fly   551 VLYLIENLQKSVDSAETVGGQGMESLMDDGYSSPANTLTLEELAPSPTPALALVPPAPSSVKSSI 615
                 :..|:...||:|.         ..||:............|||   ||.:|      ||..
  Fly   458 -----QQQQQRPGSAQTT---------PVGYTYDTTHSPYSAGGPSP---LAKIP------KSGT 499

  Fly   616 SKSVSVVNVTAARKFQQEHQKQR---ERDREQLKERTNSTQG-VIRQLSS---CLSEAETASCIL 673
            |.:....|..||.:.||:.|:|:   |..:.|......|..| ...|||:   ...:|:..:...
  Fly   500 SPTPVAPNSWAALRPQQQQQQQQPVTEGYQYQQTSPARSPSGPTYTQLSAGNGNRQQAQPGAYQA 564

  Fly   674 SPASSLSA------SEAPDTPDPHSNTSPPPSLHTRP 704
            .|....:|      .:|...|.|...|:.|...|..|
  Fly   565 GPPPPPNAPGMWDWQQAGGHPHPPHPTAHPHHPHAHP 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetNP_511126.2 bHLH_PAS 38..89 CDD:381397 18/58 (31%)
PAS 137..>186 CDD:238075 20/49 (41%)
PAS_11 401..510 CDD:464214 27/116 (23%)
tgoNP_731308.1 bHLH-PAS_ARNT 9..74 CDD:381517 22/80 (28%)
PAS 90..154 CDD:214512 24/90 (27%)
PAS_11 282..384 CDD:464214 24/101 (24%)

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