DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Met and cyc

DIOPT Version :9

Sequence 1:NP_001285132.1 Gene:Met / 32114 FlyBaseID:FBgn0002723 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_524168.2 Gene:cyc / 40162 FlyBaseID:FBgn0023094 Length:413 Species:Drosophila melanogaster


Alignment Length:472 Identity:110/472 - (23%)
Similarity:178/472 - (37%) Gaps:120/472 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SGSSSDPANGREARNLAEKQRRDKLNASIQELATMVPHAAESSRRLDKTAVLRFATHGLRLQYVF 92
            |..:|| .|.::..:..||:||||:|..|.||::|:|......|:|||..|||.|...||     
  Fly    23 SARTSD-ENRKQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHLR----- 81

  Fly    93 GKSASRRRKKTGLKGTGMSASPV-GDLPNPSLHLTD-----TLMQLLDCCFLTLTCS-GQIVLVS 150
                       |::|:| |..|. |....||. |:|     .::|..:.....:.|. |:|:.||
  Fly    82 -----------GIRGSG-SLHPFNGSDYRPSF-LSDQELKMIILQASEGFLFVVGCDRGRILYVS 133

  Fly   151 TSVEQLLGHCQSDLYGQNLLQITHPDDQDLLRQQLIPRDIETLFYQHQHHQQQGHNPQQHSTSTS 215
            .||..:|...|:||.||:...:.||.|...:::||                              
  Fly   134 DSVSSVLNSTQADLLGQSWFDVLHPKDIGKVKEQL------------------------------ 168

  Fly   216 ASTSGSDLEEEEMETEEHRLGRQQGEADDDEDHPYN--RRTPSPRR----MAHLATIDDRLRMDR 274
                 |.||:...|    ||...:.......|.|.:  |..|..||    ...|.|..:. ::..
  Fly   169 -----SSLEQCPRE----RLIDAKTMLPVKTDVPQSLCRLCPGARRSFFCRMKLRTASNN-QIKE 223

  Fly   275 RCFTVRLARASTRAEA---TRHYERVKIDGCFRRSDSSLTGGAAANYPIVSQLIRRSRNNNMLAA 336
            ...|...:|:||:.::   |.|..||          ...||...:..||..:             
  Fly   224 ESDTSSSSRSSTKRKSRLTTGHKYRV----------IQCTGYLKSWTPIKDE------------- 265

  Fly   337 AAAVAAEAATVPPQHDAIAQAALHGISGNDIVLVAMARVLREERPPEETEGTVGLTIYRQPEPYQ 401
                         ..||.:......:|    .|||:.|:     ||.....||..::...|....
  Fly   266 -------------DQDADSDEQTTNLS----CLVAIGRI-----PPNVRNSTVPASLDNHPNIRH 308

  Fly   402 LEYHTRHLIDGSIIDCDQRIGLVAGYMKDEVRNLSPFCFMHLDDVRWVIVALRQMYDCNSDYGES 466
            :.:.:||..:|..:..|||..||.|::..|:...|.:.:.|.:|:..::.:.:.:..........
  Fly   309 VLFISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQ 373

  Fly   467 CYRLLSRNGRFIYLHTK 483
            .||...::..:|.|.::
  Fly   374 VYRFRCKDNSYIQLQSE 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetNP_001285132.1 HLH 38..87 CDD:238036 20/48 (42%)
PAS 137..>186 CDD:238075 17/49 (35%)
PAS_11 403..510 CDD:291273 17/81 (21%)
cycNP_524168.2 HLH 31..84 CDD:278439 23/68 (34%)
PAS 111..212 CDD:279347 31/139 (22%)
PAS 111..173 CDD:214512 21/96 (22%)
PAS_11 311..411 CDD:291273 17/80 (21%)
PAS 311..406 CDD:238075 17/80 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3561
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23042
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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