DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Met and gce

DIOPT Version :9

Sequence 1:NP_001285132.1 Gene:Met / 32114 FlyBaseID:FBgn0002723 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_001188593.1 Gene:gce / 32457 FlyBaseID:FBgn0261703 Length:959 Species:Drosophila melanogaster


Alignment Length:822 Identity:339/822 - (41%)
Similarity:422/822 - (51%) Gaps:233/822 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GNTGSTGSA------------------GSTGSGSGSGSGSGSSSDPA------------------ 35
            |:.|:.|||                  |.|.||.|:|.|:..::.|.                  
  Fly   182 GSAGAAGSAGGAVSGGRYMGYGPGGVPGGTNSGPGAGPGAMQAAYPGHSAHMHALHHQYPQPHPH 246

  Fly    36 ------------------------------NGREARNLAEKQRRDKLNASIQELATMVPHAAESS 70
                                          :||||||.|||.||||||.|||||:|||||.|||.
  Fly   247 AHHPQHPHHSPHPHHPHPHETMMEMFQLSNSGREARNRAEKNRRDKLNGSIQELSTMVPHVAESP 311

  Fly    71 RRLDKTAVLRFATHGLRLQYVFGKSASRRRKKTGLKGTGMSASPVGDLPNPSLHLTDTLMQLLDC 135
            ||:|||||||||.|.|||::.||.|..::|.:                      :|||||.:||.
  Fly   312 RRVDKTAVLRFAAHALRLKHAFGNSLMQQRPQ----------------------ITDTLMDMLDS 354

  Fly   136 CFLTLTCSGQIVLVSTSVEQLLGHCQSDLYGQNLLQITHPDDQDLLRQQLIPRDIETLFYQHQHH 200
            .||||||.|.|:|:|.|:||.|||||||||||:::|||||:||::|:|||||.::|.||..|   
  Fly   355 FFLTLTCHGHILLISASIEQHLGHCQSDLYGQSIMQITHPEDQNMLKQQLIPTELENLFDAH--- 416

  Fly   201 QQQGHNPQQHSTSTSASTSGSDLEEEEMETEEHRLGRQQGEADDDEDHPYNRRTPSPRRMAHLAT 265
                              ..||.|.|.         ||:.:|::|                   .
  Fly   417 ------------------GDSDAEGEP---------RQRSKAEED-------------------A 435

  Fly   266 IDDRLRMDRRCFTVRLARASTRAEATRHYERVKIDGCFRRSDSSLTGGAAANYPIVSQLIRRSRN 330
            ||.:||.|||.|.||||||..|:|.|. ||.|||||||||||.:..|..:.::....|||||:|.
  Fly   436 IDRKLREDRRSFRVRLARAGPRSEPTA-YEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRRTRG 499

  Fly   331 NNMLAAAAAVAAEAATVPPQHDAIAQAALHGISGNDIVLVAMARVLREERPPEETEGTVGLTIYR 395
            .:                   |.|   .||.||||||:|...||::   |||:...        |
  Fly   500 RD-------------------DVI---PLHTISGNDIILTGCARII---RPPKIAS--------R 531

  Fly   396 QPEPYQLEYHTRHLIDGSIIDCDQRIGLVAGYMKDEVRNLSPFCFMHLDDVRWVIVALRQMYDCN 460
            ..:...|||.|||||||.|||||||||:|||||.|||||||||.|||.|||||||||||||||||
  Fly   532 LIDANTLEYKTRHLIDGRIIDCDQRIGIVAGYMTDEVRNLSPFTFMHNDDVRWVIVALRQMYDCN 596

  Fly   461 SDYGESCYRLLSRNGRFIYLHTKGFLEVDRGSNKVHSFLCVNTLLDEEAGRQKVQEMKEKFSTII 525
            |.||||.|||.:|||..|||.:||:||:|:.:||||||:||||||.||.|:::|||||:|||.||
  Fly   597 SSYGESTYRLFTRNGNIIYLQSKGYLEIDKETNKVHSFVCVNTLLGEEEGKRRVQEMKKKFSVII 661

  Fly   526 KAEMPTQSSSPDLPASQAPQQLERIVLYLIENLQKSVDSAETVGG-------------------- 570
            ..::|  .|:.|:|||:.|..||:.||.||:|||||.::    ||                    
  Fly   662 NTQIP--QSTIDVPASEHPALLEKAVLRLIQNLQKSGEN----GGHDDGDEDDDAQDGDDDEEDD 720

  Fly   571 -----QGMESLMD--DGYSS-------PANTLTLEELAPSPTPALALVPPAPSSVKSSISKSVSV 621
                 .|..|:.:  |.|.|       .::.|:......:.||.||||||..|||||:|:||:||
  Fly   721 DDDQDDGARSMSEFGDPYGSHHGRSHHGSSALSSHGHGNAKTPPLALVPPEASSVKSAITKSISV 785

  Fly   622 VNVTAARKFQQEHQKQRERDREQLKERTNS--------TQGV----IRQLSSCLSEAETASCILS 674
            ||||||:..:..|.....:....|...|.|        .||.    ::.:.|.|....||.  :.
  Fly   786 VNVTAAKHLRGIHASTAVKSPSSLGSCTCSDSHSPCDFCQGAPTTDLQAVGSNLKRGSTAH--VE 848

  Fly   675 PASSLSASE-APDTPDPHSNTSPPPSLHTRPSVLHRTLTSTL 715
            ....||... .|.|...|       .|||....:.|.||..|
  Fly   849 TEEKLSKRRFIPSTEIEH-------VLHTSLDQIGRNLTQQL 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetNP_001285132.1 HLH 38..87 CDD:238036 39/48 (81%)
PAS 137..>186 CDD:238075 34/48 (71%)
PAS_11 403..510 CDD:291273 85/106 (80%)
gceNP_001188593.1 HLH 279..325 CDD:238036 38/45 (84%)
PAS 352..>405 CDD:238075 36/52 (69%)
PAS_11 539..646 CDD:291273 85/106 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442801
Domainoid 1 1.000 166 1.000 Domainoid score I8003
eggNOG 1 0.900 - - E1_KOG3561
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 75 1.000 Inparanoid score I5172
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0016822
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23042
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.890

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