DRSC/TRiP Functional Genomics Resources

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Protein Alignment Met and ahr2

DIOPT Version :10

Sequence 1:NP_511126.2 Gene:Met / 32114 FlyBaseID:FBgn0002723 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_571339.1 Gene:ahr2 / 30517 ZFINID:ZDB-GENE-990714-16 Length:1027 Species:Danio rerio


Alignment Length:675 Identity:142/675 - (21%)
Similarity:232/675 - (34%) Gaps:209/675 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GSSSDPANGREARNLAEKQRRDKLNASIQELATMVPHAAESSRRLDKTAVLRFATHGLRLQYVFG 93
            |..|:|:          |:.||:||:.:.:|..::|.:.:...||||.:|||.:...|:::..|.
Zfish    28 GVKSNPS----------KRHRDRLNSELDKLTNLLPFSEDVRARLDKLSVLRLSVGYLKVKSFFN 82

  Fly    94 KSASRRRKKTG-----------LKGTGMSASPVGDLPNPSLHLTDTLMQLLDCCFLTLTCSGQIV 147
            .:.    ||||           ..|.|.:||   .|...:....:.|:|.|:...|.:|..|.:.
Zfish    83 ATI----KKTGGNGWLNDRSGTFGGNGQTAS---SLDGVNFSEGELLLQALNGFVLVVTAEGYVF 140

  Fly   148 LVSTSVEQLLGHCQSDLYGQNLLQITHPDDQDLLRQQLIPRDIETLFYQHQHHQQQGH---NPQQ 209
            ..|.:::..||..|||:...::.::.|.||:.:.|:||                   |   ||..
Zfish   141 YSSPTIQDYLGFHQSDVVHHSVFELIHTDDRAMFRRQL-------------------HFALNPSS 186

  Fly   210 HSTSTS-ASTSGSDLEEEEMETEEHRLGRQQGEADDDEDHPYNRRTPSPRRMAHLATIDDRLRMD 273
            .|...| |..|.||:..:.:.                    ||.:...|...:.|          
Zfish   187 DSADGSEAMQSSSDITRDMVN--------------------YNPQHIPPENSSFL---------- 221

  Fly   274 RRCFTVRLARASTRAEATRHYERVKIDGCFRRSDSSLTGGAAANYPIVSQLIRRSRNNNMLAAAA 338
            .|.|..|                      ||....:.:|..|.|:   ...::.....|.||...
Zfish   222 ERSFCCR----------------------FRCLLDNSSGFLALNF---QGRLKYLHGQNKLAEDG 261

  Fly   339 AVAAEAATVPPQHDAIAQAALHGISGNDIVLVAMARVLREERPPEETEGTVGLTIYRQPEPYQLE 403
            .:|      .||                :.|..:|..|   :||...|          .....|.
Zfish   262 TLA------HPQ----------------LALFIIATPL---QPPSILE----------IRSKTLL 291

  Fly   404 YHTRHLIDGSIIDCDQRIGLVAGYMKDEV-RNLSPFCFMHLDDVRWVIVALRQMYDCNSDY---- 463
            :.|:|.:|.:.:..|.|..:|.||.:.|: ...|.:.|:|..|:         || |..::    
Zfish   292 FQTKHKLDFTPMGIDTRGKVVLGYTEIELCMRGSGYQFIHAADM---------MY-CADNHIRMI 346

  Fly   464 --GES---CYRLLSRNGRFIYLHTKGFLEVDRGSNKVHSFLCVNTLLDEEAGRQKVQEMK----- 518
              |||   .:||||:.|.:|::.....|....|  :....:.....|..|.|.:.:::.|     
Zfish   347 KTGESGLTVFRLLSKGGTWIWVQANARLVYKAG--RPDFIIARQRALTNEEGEEHLRQRKLQLPF 409

  Fly   519 ----------EKFSTIIKAEMPTQSSSPDL--PASQAPQQL------ERIVLYLIENLQKSVDSA 565
                      |...|:..||:..||....:  |.|..|..|      :...||...|...|..:.
Zfish   410 NCATGEGVLYEVGPTLDVAEIQNQSKGQKMLNPPSLDPDSLLGSMLKQDHSLYSQNNDPNSQFTI 474

  Fly   566 ETVGGQGMESLMDDGYSSPANTLTLEELAPSPTPALALVPPAPSSVKSSISKSVSVV----NVTA 626
            :...|.....|     :.|.|  |.:...|:..|.:    ...:.||..:.....::    |..:
Zfish   475 DKAFGDSHALL-----NVPGN--TWQPSTPNTVPGI----KEEAVVKDMLETLQQIIEVGNNCNS 528

  Fly   627 ARKFQQEHQKQRERDREQLKERTNS 651
            ...|        ..||.:|||..|:
Zfish   529 LEDF--------NLDRMELKEWENT 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetNP_511126.2 bHLH_PAS 38..89 CDD:381397 15/50 (30%)
PAS 137..>186 CDD:238075 14/48 (29%)
PAS_11 401..510 CDD:464214 30/118 (25%)
ahr2NP_571339.1 bHLH-PAS_AhR_like 27..85 CDD:381539 19/66 (29%)
PAS 120..183 CDD:214512 19/81 (23%)
PAS_3 312..386 CDD:430001 22/85 (26%)
Med15 <600..>832 CDD:312941
Blue background indicates that the domain is not in the aligned region.

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