Sequence 1: | NP_001285132.1 | Gene: | Met / 32114 | FlyBaseID: | FBgn0002723 | Length: | 716 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032745.2 | Gene: | Npas2 / 18143 | MGIID: | 109232 | Length: | 816 | Species: | Mus musculus |
Alignment Length: | 756 | Identity: | 160/756 - (21%) |
---|---|---|---|
Similarity: | 261/756 - (34%) | Gaps: | 249/756 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 38 REARNLAEKQRRDKLNASIQELATMVPHAAESSRRLDKTAVLRFATHGLRLQYVFGKSASRRRKK 102
Fly 103 TGL--KGTGMSA-SPVGDLP---NPSL----HLTDTLMQLLDCCFLTLTCSGQIVLVSTSVEQLL 157
Fly 158 GHCQSDLYGQNLLQITHPDDQDLLRQQLIPRDIETLFYQHQHHQQ-----QGHNPQQHSTSTSAS 217
Fly 218 TSGSDLEEEEMETEEHRLGRQQGEADDDEDHPYNRRTPSPRRMAHLATIDDRLRMDRRCFTVRLA 282
Fly 283 RASTRAEATRHYERVKIDGCFRRSDSSLTGGAAANYPIVSQLIRRSRNNNMLAAAAAVAAEAATV 347
Fly 348 PPQ----HDAIAQAALHGISGNDIVLVAMARVLREERPPEETEGTVGLTIYRQPEPYQLEYHTRH 408
Fly 409 LIDGSIIDCDQRIGLVAGYMKDEVRNLSPFCFMHLDDVRWVIVALRQMYDCNSDYGES-CYRLLS 472
Fly 473 RNGRFIYLHTKGFLEVDRGSNKVHSFLCVNTLLDEEAGR-QKVQEM---------------KEKF 521
Fly 522 STIIKAEMPTQSSSPD-----LPASQAPQQLERIVLYLIENLQKSVDSAETVGGQGMESLMDDGY 581
Fly 582 SSPANTLTLEELAPSPTPA-------------LALVPPA-PSSVKSSISKSVSVVNV-------- 624
Fly 625 -TAARKFQQEHQKQRERDREQLKERTNSTQGVIRQLSSCLSEAETASCIL----------SPASS 678
Fly 679 LSASEAPDTPDPHSNTSPPPSLHTRPSVLHRT-----LTST 714 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Met | NP_001285132.1 | HLH | 38..87 | CDD:238036 | 20/48 (42%) |
PAS | 137..>186 | CDD:238075 | 15/48 (31%) | ||
PAS_11 | 403..510 | CDD:291273 | 25/107 (23%) | ||
Npas2 | NP_032745.2 | bHLH-PAS_NPAS2_PASD4 | 1..77 | CDD:381580 | 26/88 (30%) |
Sufficient for heterodimer formation with ARNTL/BMAL1, E-box binding and for the effect of NADPH. /evidence=ECO:0000269|PubMed:23831463 | 1..61 | 23/72 (32%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..21 | 5/9 (56%) | |||
PAS | 84..195 | CDD:366402 | 37/207 (18%) | ||
PAS_11 | 249..352 | CDD:373151 | 25/105 (24%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 364..431 | 17/87 (20%) | |||
omega_3_PfaA | <440..>740 | CDD:274311 | 32/159 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 610..639 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 685..705 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 742..816 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167834647 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |