DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Met and PASD1

DIOPT Version :9

Sequence 1:NP_001285132.1 Gene:Met / 32114 FlyBaseID:FBgn0002723 Length:716 Species:Drosophila melanogaster
Sequence 2:NP_775764.2 Gene:PASD1 / 139135 HGNCID:20686 Length:773 Species:Homo sapiens


Alignment Length:646 Identity:115/646 - (17%)
Similarity:200/646 - (30%) Gaps:246/646 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 RRRKKTGLKGTGMSASPVGDLPNPSLHLTDTLMQLLDCCFLTLTCSGQIVLVSTSVEQLLGHCQS 162
            :||.|...|.:....:.:...|... :.....:||||...:||:..|.|:.|:.::..||||..:
Human     7 KRRDKVNPKSSQRKLNWIPSFPTYD-YFNQVTLQLLDGFMITLSTDGVIICVAENISSLLGHLPA 70

  Fly   163 DLYGQNLLQITHPDDQDLLRQQLIPRDIETLFYQHQHHQQQGHNPQQHSTSTSASTSGSDLEEEE 227
            ::.|:.||.:...:::|.:.|::|                                    |:...
Human    71 EIVGKKLLSLLPDEEKDEVYQKII------------------------------------LKFPL 99

  Fly   228 METEEHRLGRQQGEADDDEDHPYNRRTPSPRRMAHLATIDDRLRMDRRCFTVRLARASTRAEATR 292
            :.:|.|                                |:         |...|.|.:.....:.
Human   100 LNSETH--------------------------------IE---------FCCHLKRGNVEHGDSS 123

  Fly   293 HYERVKI-----DGCFRRSDSSLTGGAAANYPIVSQLIRRSRNNNMLAAAAAVAAEAATVPPQHD 352
            .||.||.     |.|             ..:|:|...:..|.          :.|:.|...||.|
Human   124 AYENVKFIVNVRDIC-------------NEFPVVFSGLFSSH----------LCADFAACVPQED 165

  Fly   353 AIAQAALHGISGNDIVLVAMARVLREERPPEETEGTVGLTIYRQPEPYQLEY--------HTRHL 409
            .:.      :.||  |.:...::|::....:.......||.....||:..|.        ||   
Human   166 RLY------LVGN--VCILRTQLLQQLYTSKAVSDEAVLTQDSDEEPFVGELSSSQGQRGHT--- 219

  Fly   410 IDGSIIDCDQRIGLVAGYMKD------EVRNLSPFCFMHLDDVRWVIVALRQMYDCNSDYGESCY 468
             ....:..:......|..:.|      ||....|...:|:            ..|.:|.|..|. 
Human   220 -SMKAVYVEPAAAAAAAAISDDQIDIAEVEQYGPQENVHM------------FVDSDSTYCSST- 270

  Fly   469 RLLSRNGRFIYLHTKG-----FLEVDRGSNKVHSFLCVNTL-----------LDEEAGRQKVQEM 517
                     ::|.|..     .|:..||..:|:.....:.:           :|:| |....|:.
Human   271 ---------VFLDTMPESPALSLQDFRGEPEVNPLYRADPVDLEFSVDQVDSVDQE-GPMDQQDP 325

  Fly   518 KEKFSTIIKAEM--------------------PTQSSSP---DLPASQ------APQQLERIVLY 553
            :...:.:.:|.:                    |.|.|||   |:.:.:      ..:|||.....
Human   326 ENPVAPLDQAGLMDPVDPEDSVDLGAAGASAQPLQPSSPVAYDIISQELELMKKLKEQLEERTWL 390

  Fly   554 LIENLQKSVDSAETVGGQGMESLMDDGYSSPANTL---TLEELAPSPTPALALVP---------- 605
            |.:.:|...::.|         ||.|......|||   .:.:|..|..     ||          
Human   391 LHDAIQNQQNALE---------LMMDHLQKQPNTLRHVVIPDLQSSEA-----VPKKQQKQHAGQ 441

  Fly   606 -----PAPSSVK--SSISKSVSVVNVTAARK-----------FQQEHQKQRERD-REQLKE 647
                 |.|..||  ..:|.|.|:.|....::           .|::|.|:::|. ||||::
Human   442 VKRPLPHPKDVKCFCGLSLSNSLKNTGELQEPCVAFNQQQLVQQEQHLKEQQRQLREQLQQ 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetNP_001285132.1 HLH 38..87 CDD:238036
PAS 137..>186 CDD:238075 14/48 (29%)
PAS_11 403..510 CDD:291273 21/136 (15%)
PASD1NP_775764.2 PAS 41..137 CDD:238075 28/172 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..361 6/48 (13%)
Necessary for transcriptional repression. /evidence=ECO:0000269|PubMed:25936801 365..412 10/55 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 427..448 3/25 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 506..569
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 732..773
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144516
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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