DRSC/TRiP Functional Genomics Resources

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Protein Alignment Met and NCOA2

DIOPT Version :10

Sequence 1:NP_511126.2 Gene:Met / 32114 FlyBaseID:FBgn0002723 Length:716 Species:Drosophila melanogaster
Sequence 2:XP_016868450.1 Gene:NCOA2 / 10499 HGNCID:7669 Length:1533 Species:Homo sapiens


Alignment Length:830 Identity:162/830 - (19%)
Similarity:258/830 - (31%) Gaps:279/830 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SGSGSGSSSDPAN-------------GREARNLAEKQRRDKLNASIQELATMV----PHAAESSR 71
            ||.|. ::|||:.             |...:...||:.|::.|..|:|||.::    ......:.
Human     2 SGMGE-NTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFANFNDIDNFNF 65

  Fly    72 RLDKTAVLRFATHGLRLQYVFGKSASR---RRKKTGLKGTGMSASPVGDLPNPSLHLTDTLMQLL 133
            :.||.|:|:.....:|......|:|:.   ..:|:.:..||.     |.:...:  |...:::.|
Human    66 KPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQ-----GVIDKDA--LGPMMLEAL 123

  Fly   134 DCCFLTLTCSGQIVLVSTSVEQLLGHCQSDLYGQNLLQITHPDDQDLLRQQLIPRDIETLFYQHQ 198
            |..|..:...|.:|.||.:|.|.|.:.|.:|..:::..|.|..|.....:.|:|:.|.      .
Human   124 DGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLLPKSIV------N 182

  Fly   199 HHQQQGHNPQQHSTSTSASTSGSDLEEEEMETEEHRLGRQQGEA-------------DDDEDHP- 249
            .....|..|:::|.:.:.......|.:.|.|..:::...|:.|.             ::.||.. 
Human   183 GGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQS 247

  Fly   250 ----YNRRTPSPRR------------------MAHLATIDDRLRMD-------RRCFTVRLARAS 285
                ..||.|...|                  :..|.|...|..|.       |||  ::...|.
Human   248 CLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGWEDLVRRC--IQKFHAQ 310

  Fly   286 TRAE----ATRHYERVKIDGC-------FRRSD---------SSLTGGAAANYP-IVSQLIRRSR 329
            ...|    |.||:..|...|.       |..||         |.|......|.| :|..|....|
Human   311 HEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLIRSQTTNEPQLVISLHMLHR 375

  Fly   330 NNNMLAAAAAVAAEAATVP--------PQHDAIAQAALHGISGNDIVLVAMARVLREERPPEETE 386
            ..|:......:..:....|        |.|    ||...|..|.|:.|.:....     |....:
Human   376 EQNVCVMNPDLTGQTMGKPLNPISSNSPAH----QALCSGNPGQDMTLSSNINF-----PINGPK 431

  Fly   387 GTVGLTIYR------------------QPEPYQLEYHT-------------------RHLIDGSI 414
            ..:|:.:.|                  |...|.|:.::                   ||.:... 
Human   432 EQMGMPMGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPGMNPGQPTSMLSPRHRMSPG- 495

  Fly   415 IDCDQRIGLVAGYMKDEVRNLSPFCFMHLDDVRWVIVALRQMYDCNSDYGESCYRLLSRNGRFIY 479
                     |||..:......||...:|                  |..|               
Human   496 ---------VAGSPRIPPSQFSPAGSLH------------------SPVG--------------- 518

  Fly   480 LHTKGFLEVDRGSNKVHSFLCVNTLLDEEAGRQKVQEMKEKFSTIIKAEMPTQSSSPDL------ 538
                    |...:...||:  .|:.|:      .:|.:.|.....:.:.:    :||||      
Human   519 --------VCSSTGNSHSY--TNSSLN------ALQALSEGHGVSLGSSL----ASPDLKMGNLQ 563

  Fly   539 --PASQAPQQLERIVLYLIENLQKSVDSAETVG--GQGMESLMDDGYSS--PANTLTLEELAPSP 597
              |.:..|..|.::         .|:||.:..|  |:..|.......||  |.      |...:.
Human   564 NSPVNMNPPPLSKM---------GSLDSKDCFGLYGEPSEGTTGQAESSCHPG------EQKETN 613

  Fly   598 TPALALVPPAPSSVKSSISKSVSVVNVTAARKFQQEHQKQRERDREQLKERTNSTQGVIRQLSSC 662
            .|.|   |||.||                            ||...|.:...:..|..:.||.:.
Human   614 DPNL---PPAVSS----------------------------ERADGQSRLHDSKGQTKLLQLLTT 647

  Fly   663 LSEAETASCILSPASSLSASEAPDTPD-PHSNTSPPPSLHTRPSVLHRTL 711
            .|:....|.:   |||||.:....|.. |.|.::...||..:..:|||.|
Human   648 KSDQMEPSPL---ASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLL 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetNP_511126.2 bHLH_PAS 38..89 CDD:381397 13/54 (24%)
PAS 137..>186 CDD:238075 13/48 (27%)
PAS_11 401..510 CDD:464214 16/127 (13%)
NCOA2XP_016868450.1 bHLH-PAS_NCoA2_SRC2 28..91 CDD:381520 14/62 (23%)
PAS 118..175 CDD:214512 15/56 (27%)
PAS_11 268..378 CDD:464214 24/111 (22%)
NCOA_u2 463..587 CDD:465223 29/195 (15%)
SRC-1 636..709 CDD:462615 19/62 (31%)
DUF4927 731..816 CDD:465083
Nuc_rec_co-act 1071..1115 CDD:462608
DUF1518 1351..1407 CDD:462174
Blue background indicates that the domain is not in the aligned region.

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