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Protein Alignment RPA3 and Rpa3
DIOPT Version :9
Sequence 1: | NP_001285131.1 |
Gene: | RPA3 / 32113 |
FlyBaseID: | FBgn0266421 |
Length: | 112 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001100054.1 |
Gene: | Rpa3 / 296883 |
RGDID: | 1306810 |
Length: | 121 |
Species: | Rattus norvegicus |
Alignment Length: | 109 |
Identity: | 27/109 - (24%) |
Similarity: | 44/109 - (40%) |
Gaps: | 2/109 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 PRSIINGGMLKQFSGQTVSIMVRVESV--AGSTLLASSTDNHKLKINLPGELGAAEGAWVEVIGV 68
|::.:|..||.|:..:.|..:.::|.: .|...:.|..:.....|.|...|.......|||:|.
Rat 8 PKARVNASMLSQYIERPVCFVGKLEKIHPTGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVGK 72
Fly 69 PHGADTLRAKEVIEFGGENIDFDKDGYNGLSHLINNVKAFYRSG 112
.....|:.....|.|..:...||.:.||....:||....|:..|
Rat 73 VTAKATILCASYILFKEDCNRFDLELYNEAVKIINEFPQFFPLG 116
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1594928at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0007241 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_103793 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR15114 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.920 |
|
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