Protein Alignment RPA3 and Rpa3

DIOPT Version :9

• Sequence 1: NP_001285131.1
• Gene: RPA3 / 32113
• FlyBaseID: FBgn0266421
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_001100054.1
• Gene: Rpa3 / 296883
• RGDID: 1306810
• Length: 121
• Species: Rattus norvegicus
• Alignment Length: 109
• Identity: 27/109 - (24%)
• Similarity: 44/109 - (40%)
• Gaps: 2/109 - (1%)

  Fly     6 PRSIINGGMLKQFSGQTVSIMVRVESV--AGSTLLASSTDNHKLKINLPGELGAAEGAWVEVIGV 68
            |::.:|..||.|:..:.|..:.::|.:  .|...:.|..:.....|.|...|.......|||:|.
  Rat     8 PKARVNASMLSQYIERPVCFVGKLEKIHPTGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVGK 72

  Fly    69 PHGADTLRAKEVIEFGGENIDFDKDGYNGLSHLINNVKAFYRSG 112
            .....|:.....|.|..:...||.:.||....:||....|:..|
  Rat    73 VTAKATILCASYILFKEDCNRFDLELYNEAVKIINEFPQFFPLG 116

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RPA3	NP_001285131.1	Rep_fac-A_3	1..109	CDD:400821	25/104 (24%)
Rpa3	NP_001100054.1	Rep_fac-A_3	5..113	CDD:285824	25/104 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1594928at2759
OrthoFinder	1	1.000	-	-		FOG0007241
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_103793
Panther	1	1.100	-	-	LDO	PTHR15114
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.920