Protein Alignment RPA3 and ssb3

DIOPT Version :9

• Sequence 1: NP_001285131.1
• Gene: RPA3 / 32113
• FlyBaseID: FBgn0266421
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_588128.1
• Gene: ssb3 / 2538775
• PomBaseID: SPCC23B6.05c
• Length: 104
• Species: Schizosaccharomyces pombe
• Alignment Length: 108
• Identity: 25/108 - (23%)
• Similarity: 45/108 - (41%)
• Gaps: 10/108 - (9%)

  Fly     1 MDAFDPRSIINGGMLKQFSGQTVSIMVRVESVAGSTLLASSTDNHKLKINLPGELGAAEGAWVEV 65
            |:...||  :...||.:.||:||.|:.:...|.|.|....|..:..:.:.:...|  ....:.|.
pombe     1 MERPTPR--VTKDMLPECSGKTVRIVGKANQVEGETAKVDSNGSFDMHLTVDNTL--EPNHFYEF 61

  Fly    66 IGVPHGADTLRAKEVIEFGGENIDFDKDGYNGL---SHLINNV 105
            :.......:::....::||   .|.|.:.|..|   ||..|::
pombe    62 VVSVKPDSSVQLLTCVDFG---TDIDMEVYQKLVLFSHKYNSL 101

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RPA3	NP_001285131.1	Rep_fac-A_3	1..109	CDD:400821	25/108 (23%)
ssb3	NP_588128.1	Rep_fac-A_3	1..102	CDD:285824	25/108 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_2CZSS
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_103793
Panther	1	1.100	-	-	LDO	PTHR15114
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.900