DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1703 and ARB1

DIOPT Version :9

Sequence 1:NP_001285130.1 Gene:CG1703 / 32112 FlyBaseID:FBgn0030321 Length:901 Species:Drosophila melanogaster
Sequence 2:NP_010953.1 Gene:ARB1 / 856758 SGDID:S000000838 Length:610 Species:Saccharomyces cerevisiae


Alignment Length:630 Identity:226/630 - (35%)
Similarity:368/630 - (58%) Gaps:49/630 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 PDEEADAEVDSKFEESKEAKE----KKLTHKEKKKQKKQQEYE--------RQMELMTKKGGAGH 324
            |...:.|:.|:|..| :|||:    |.:....:||:...:|.|        :.|:|...|.|.  
Yeast     3 PVSASKAKRDAKKAE-REAKKAAAGKTIRKLGRKKEAAAEESEVDAAAREIKMMKLQQDKDGL-- 64

  Fly   325 SDLDNNFTMSQVQKSAGQKAALEQAVDIKIENFTISAKGNDLFVNANLLIAHGRRYGLVGPNGHG 389
            ||          :...|..::||.:.|||:.:.::...|..|..::.|.:.:||||||:|.||.|
Yeast    65 SD----------RVVTGVLSSLETSRDIKLSSVSLLFHGKVLIQDSGLELNYGRRYGLLGENGCG 119

  Fly   390 KTTLLRHIATRAFAIPPNIDVLLCEQEVVATDKTAIN-TILEADVRRTEMLKKADELEKQFVAGD 453
            |:|.|:.:|||.:.||.:||:.|.::....::.:|:: .:.||.    ..||:.::|.::.:..|
Yeast   120 KSTFLKALATREYPIPEHIDIYLLDEPAEPSELSALDYVVTEAQ----HELKRIEDLVEKTILED 180

  Fly   454 LTVQEELNDTFAELKAIGAYSAEARARRILAGLGFSKEMQDRPTNKFSGGWRMRVSLARALYLEP 518
            ....|.|...:..:.::...:.|:||..||.||||:|:...:.|...||||:|||:||:||:::|
Yeast   181 GPESELLEPLYERMDSLDPDTFESRAAIILIGLGFNKKTILKKTKDMSGGWKMRVALAKALFVKP 245

  Fly   519 TLLMLDEPTNHLDLNAVIWLDNYLQGWKKTLLIVSHDQSFLDNVCNEIIHLDQKKLQYYKGNYSM 583
            |||:||:||.||||.|.:||:.||:.:.:||::|||.|.||:.||..:|.:..:||..|.|||..
Yeast   246 TLLLLDDPTAHLDLEACVWLEEYLKRFDRTLVLVSHSQDFLNGVCTNMIDMRAQKLTAYGGNYDS 310

  Fly   584 FKKMYVQKRREMIKEYEKQEKRLRELKAHGQSKKAAEKKQKESLTRKQEKNKSKQQKQDEDEGPQ 648
            :.|...:.....:|:|.||::.::.:|     |..|......:|. ||.|::.|...:.|.:|  
Yeast   311 YHKTRSELETNQMKQYNKQQEEIQHIK-----KFIASAGTYANLV-KQAKSRQKILDKMEADG-- 367

  Fly   649 ELLARP--KEYIVKFRFPEPSQLQPPILGVHNVTFAF---PSQKPLFIKVDFGIDLTSRVAIVGP 708
              |.:|  .:.:..||||:..:|.||:|...:::|.:   ||:. |:..::||:|:.||:|:|||
Yeast   368 --LVQPVVPDKVFSFRFPQVERLPPPVLAFDDISFHYESNPSEN-LYEHLNFGVDMDSRIALVGP 429

  Fly   709 NGVGKSTFLKLLLGELEPQEGEQRKNHRLHVGRFDQHSGEHLTAEESAAEYLQ-RLFNLPHEKA- 771
            |||||||.||::.|||.||.|...::..:.:|.:.|||.:.|...:||.|::: :..|:..:.. 
Yeast   430 NGVGKSTLLKIMTGELTPQSGRVSRHTHVKLGVYSQHSQDQLDLTKSALEFVRDKYSNISQDFQF 494

  Fly   772 -RKALGSFGLVSHAHTIKMKDLSGGQKARVALAELCLSAPDVLILDEPTNNLDIESIDALAEAIN 835
             |..||.:||.....|::|..||.||::||..|.|.|..|:||:||||||.|||.:||:||:|||
Yeast   495 WRGQLGRYGLTGEGQTVQMATLSEGQRSRVVFALLALEQPNVLLLDEPTNGLDIPTIDSLADAIN 559

  Fly   836 EYEGGVIIVSHDERLIRETGCTLYVIEDQTINEIVGEFDDYRKEV 880
            |:.|||::||||.||:.:....::|:|::|.....|....|:.::
Yeast   560 EFNGGVVVVSHDFRLLDKIAQDIFVVENKTATRWDGSILQYKNKL 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1703NP_001285130.1 Uup 351..879 CDD:223562 204/536 (38%)
ABCF_EF-3 352..573 CDD:213188 85/221 (38%)
ABC_tran_Xtn 567..>611 CDD:289608 12/43 (28%)
ABCF_EF-3 676..865 CDD:213188 84/194 (43%)
ARB1NP_010953.1 Uup 79..601 CDD:223562 203/536 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.