DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1703 and Abcf1

DIOPT Version :9

Sequence 1:NP_001285130.1 Gene:CG1703 / 32112 FlyBaseID:FBgn0030321 Length:901 Species:Drosophila melanogaster
Sequence 2:NP_001103353.1 Gene:Abcf1 / 85493 RGDID:620286 Length:839 Species:Rattus norvegicus


Alignment Length:916 Identity:458/916 - (50%)
Similarity:584/916 - (63%) Gaps:122/916 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LEKVQEKKPP------------TSKKGGKKGKRGGGGGDSSDEDVTTRNRDNEDLESIASSNQSK 71
            :.|..:::||            .:.|..||||:......:..|::...::...:.|.:....:.:
  Rat     1 MPKGPKQQPPEPEWIGDGEGTSPADKVVKKGKKDKKTKKTFFEELAVEDKQAGEEEKLQKEKEQQ 65

  Fly    72 QQTAGKKQAKKGKKGKRNNDWSDEDEKPEK---------SLPANDLDDEDDDEAPLASKPAAKKP 127
            ||...:|:.:..:||:|..|..|:|:..|:         |:||:|    ::||.|:        |
  Rat    66 QQQQQQKKKRDTRKGRRKKDVDDDDDGDERVLMERLKQLSVPASD----EEDEVPV--------P 118

  Fly   128 QPSKKNKKNKKKN------DDFSDEDKPELDLDDLDNEEDEVEVVAVKPASKKSKKKQQAQQKNM 186
            .| :..||.|..|      .|.|:|:|           |:|.|...:|||.         .:||.
  Rat   119 VP-RGRKKAKGGNVFEALIQDESEEEK-----------EEEEEKPVLKPAK---------PEKNR 162

  Fly   187 FAMSDDEEDEVADDLPNDSEEEEKEQLSNKAAKESK---KEQQKQPEKEVEEQKVEQVLSEKVAA 248
            .               |.:..||...|.||..||.|   |.:.|....:.|.:..|.:..||   
  Rat   163 I---------------NKAVAEEPPGLRNKKGKEEKSKGKAKNKPSATDSEGEDDEDMTKEK--- 209

  Fly   249 VSLKEKTPEPVPKAEPEPESEPQPDEEAD---AEVDSKFEESKEAKEKK---------LTHKEKK 301
                            ||   |:|.::.|   ||..|  ||.||.||.:         |:.||||
  Rat   210 ----------------EP---PRPGKDKDKKGAEQGS--EEEKEEKEGEVKANDPYAHLSKKEKK 253

  Fly   302 KQKKQQEYERQMELMTKKGGAGHSDLDNNFTMSQVQKSAGQKAALEQAVDIKIENFTISAKGNDL 366
            |.|||.:||||:|.:.....|     :|:|::||.:.|:.| |.||.|.|||:|.|:|||.|.:|
  Rat   254 KLKKQMDYERQVESLKAANAA-----ENDFSVSQAEVSSRQ-AMLENASDIKLEKFSISAHGKEL 312

  Fly   367 FVNANLLIAHGRRYGLVGPNGHGKTTLLRHIATRAFAIPPNIDVLLCEQEVVATDKTAINTILEA 431
            ||||:|.|..|||||||||||.||||||:|||.||.:||||||||||||||||.:..|:..:|.|
  Rat   313 FVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCEQEVVADETPAVQAVLRA 377

  Fly   432 DVRRTEMLKKADELEKQFVAGDLTVQEELNDTFAELKAIGAYSAEARARRILAGLGFSKEMQDRP 496
            |.:|..:|::...|:.|...||.|..|:|...:.||:|.||.:|||:||||||||||..|||:||
  Rat   378 DTKRLRLLEEEKRLQGQLEQGDDTAAEKLEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRP 442

  Fly   497 TNKFSGGWRMRVSLARALYLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWKKTLLIVSHDQSFLDN 561
            |.||||||||||||||||::||||||||||||||||||||||:||||||:||||||||||.|||:
  Rat   443 TQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDD 507

  Fly   562 VCNEIIHLDQKKLQYYKGNYSMFKKMYVQKRREMIKEYEKQEKRLRELKAHGQSKKAAEKKQKES 626
            ||.:|||||.::|.||:|||..|||||.||::|::|:||||||:|:||||.|:|.|.|||:.||.
  Rat   508 VCTDIIHLDTQRLHYYRGNYMTFKKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEV 572

  Fly   627 LTRKQEKNKSKQQKQDEDEGPQELLARPKEYIVKFRFPEPSQLQPPILGVHNVTFAFPSQKPLFI 691
            |||||:|.:.|.| .:|.:.|.|||.||:||.|:|.||:|..|.||:||:|.|||.:..|||||.
  Rat   573 LTRKQQKCRRKNQ-DEESQDPPELLKRPREYTVRFTFPDPPPLSPPVLGLHGVTFGYEGQKPLFK 636

  Fly   692 KVDFGIDLTSRVAIVGPNGVGKSTFLKLLLGELEPQEGEQRKNHRLHVGRFDQHSGEHLTAEESA 756
            .:|||||:.||:.|||||||||||.|.||.|:|.|..||.||||||.:|.|:|...|.|..||:.
  Rat   637 NLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTNGEMRKNHRLKIGFFNQQYAEQLHMEETP 701

  Fly   757 AEYLQRLFNLPHEKARKALGSFGLVSHAHTIKMKDLSGGQKARVALAELCLSAPDVLILDEPTNN 821
            .|||||.||||::.|||.||.|||.||||||::..|||||||||..|||....||||||||||||
  Rat   702 TEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNN 766

  Fly   822 LDIESIDALAEAINEYEGGVIIVSHDERLIRETGCTLYVIEDQTINEIVGEFDDYRKEVLDSLGE 886
            |||||||||.||||||:|.||:||||.|||.||.|.|:|:|:|::::|.|:||||::|||::|||
  Rat   767 LDIESIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFDDYKREVLEALGE 831

  Fly   887 V-VNNP 891
            | ||.|
  Rat   832 VMVNRP 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1703NP_001285130.1 Uup 351..879 CDD:223562 349/527 (66%)
ABCF_EF-3 352..573 CDD:213188 154/220 (70%)
ABC_tran_Xtn 567..>611 CDD:289608 28/43 (65%)
ABCF_EF-3 676..865 CDD:213188 126/188 (67%)
Abcf1NP_001103353.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..258 81/328 (25%)
Uup 296..827 CDD:223562 351/531 (66%)
ABCF_EF-3 298..519 CDD:213188 154/220 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 553..600 26/47 (55%)
ABCF_EF-3 621..809 CDD:213188 126/187 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353117
Domainoid 1 1.000 216 1.000 Domainoid score I2623
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H849
Inparanoid 1 1.050 800 1.000 Inparanoid score I474
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 1 1.000 - - FOG0006074
OrthoInspector 1 1.000 - - oto95728
orthoMCL 1 0.900 - - OOG6_104427
Panther 1 1.100 - - LDO PTHR19211
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4371
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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