DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1703 and GCN20

DIOPT Version :9

Sequence 1:NP_001285130.1 Gene:CG1703 / 32112 FlyBaseID:FBgn0030321 Length:901 Species:Drosophila melanogaster
Sequence 2:NP_116664.1 Gene:GCN20 / 850561 SGDID:S000001905 Length:752 Species:Saccharomyces cerevisiae


Alignment Length:728 Identity:245/728 - (33%)
Similarity:381/728 - (52%) Gaps:93/728 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 QQKQPEKEVEEQKVEQVLSEKVAAVSLKEKTPEPVPK------AEPEPESEPQPD---------- 273
            |.||.:...|.|.|..:|.:..|:.:..::..|.:.|      .|.|.:.|...|          
Yeast    39 QSKQVDLSTEVQFVSDLLIDAGASKAKVKELSESILKQLTTQLKENEAKLELTGDTSKRLLDINV 103

  Fly   274 -----------------------EEADAEVDSKFEESKEAK-EKKLTHKEKKKQKKQQEYERQME 314
                                   |....:::::.:..|.|| |:|:..|..|:..|..:||....
Yeast   104 LKSHNSKSDINVSLSMLGVNGDIEHTGRKMETRVDLKKLAKAEQKIAKKVAKRNNKFVKYEASKL 168

  Fly   315 LMTKKGGAGHSDLDNNFTM---SQVQKSAGQKAALEQAVDIKIENFTI-SAKGNDLFVNANLLIA 375
            :..:|    ..|.|:.|..   .:...|||      ::.||.|:.|.: ...|..:..||.|.::
Yeast   169 INDQK----EEDYDSFFLQINPLEFGSSAG------KSKDIHIDTFDLYVGDGQRILSNAQLTLS 223

  Fly   376 HGRRYGLVGPNGHGKTTLLRHIATRAFAIPPNIDVLLCEQEVVATDKTAINTILEADVRR----- 435
            .|.||||||.||.||:||||.::.|...:|.::.:|..|||:...|..|:.::|:|||.|     
Yeast   224 FGHRYGLVGQNGIGKSTLLRALSRRELNVPKHVSILHVEQELRGDDTKALQSVLDADVWRKQLLS 288

  Fly   436 -----TEMLKKADELEKQFVAGDLTV------QEELNDTFAEL--KAIGAYS--AEARARRILAG 485
                 .|.||:.|.|.::|....|.|      :|:|::...::  |.:...|  |||||..||.|
Yeast   289 EEAKINERLKEMDVLRQEFEEDSLEVKKLDNEREDLDNHLIQISDKLVDMESDKAEARAASILYG 353

  Fly   486 LGFSKEMQDRPTNKFSGGWRMRVSLARALYLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWKKTLL 550
            ||||.|.|.:|||.||||||||:||||||:.:|.||:||||:|.||:.::.:|..||:.:..|:|
Yeast   354 LGFSTEAQQQPTNSFSGGWRMRLSLARALFCQPDLLLLDEPSNMLDVPSIAYLAEYLKTYPNTVL 418

  Fly   551 IVSHDQSFLDNVCNEIIHLDQKKLQYYKG-NYSMFKKMYVQKRREMIKEYEKQ---EKRLRELKA 611
            .||||::||:.|..:||:...::|.||:| ::..|.....::|:...:||:.|   .|.|:|. .
Yeast   419 TVSHDRAFLNEVATDIIYQHNERLDYYRGQDFDTFYTTKEERRKNAQREYDNQMVYRKHLQEF-I 482

  Fly   612 HGQSKKAAEKKQKESLTRKQEKNKSKQQKQDEDEGPQELLARPKEYIVKFRFPEPSQLQPPILGV 676
            ......||:.::.:|..:|.||....:        |.|     ::..:.|:|||..:|.|||:.:
Yeast   483 DKYRYNAAKSQEAQSRIKKLEKLPVLE--------PPE-----QDKTIDFKFPECDKLSPPIIQL 534

  Fly   677 HNVTFAFPSQKPLFIKVDFGIDLTSRVAIVGPNGVGKSTFLKLLLGELEPQEGEQRKNHRLHVGR 741
            .:|:|.:.....|...|:..:.:.||:|:||.||.||:|.||:::.:|.|.:|...:|.||.:|.
Yeast   535 QDVSFGYDENNLLLKDVNLDVQMDSRIALVGANGCGKTTLLKIMMEQLRPLKGFVSRNPRLRIGY 599

  Fly   742 FDQHSGEHLTAEESAAEYLQRLF-NLPHEKARKALGSFGLVSHAHTIKMKDLSGGQKARVALAEL 805
            |.||..:.:....||.:::.:.| ....|:.|:.|||||:.......||:.||||||:|||.|.|
Yeast   600 FTQHHVDSMDLTTSAVDWMSKSFPGKTDEEYRRHLGSFGITGTLGLQKMQLLSGGQKSRVAFAAL 664

  Fly   806 CLSAPDVLILDEPTNNLDIESIDALAEAINEYEGGVIIVSHDERLIRETGCTLYVIEDQTINEIV 870
            ||:.|.:|:||||:|:||...:|||.||:..:.|||::||||..:|......::|.|..|:....
Yeast   665 CLNNPHILVLDEPSNHLDTTGLDALVEALKNFNGGVLMVSHDISVIDSVCKEIWVSEQGTVKRFE 729

  Fly   871 GEFDDYRKEVLDS 883
            |...|||..:|.|
Yeast   730 GTIYDYRDYILQS 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1703NP_001285130.1 Uup 351..879 CDD:223562 211/553 (38%)
ABCF_EF-3 352..573 CDD:213188 102/241 (42%)
ABC_tran_Xtn 567..>611 CDD:289608 13/47 (28%)
ABCF_EF-3 676..865 CDD:213188 75/189 (40%)
GCN20NP_116664.1 PLN03073 <190..742 CDD:215558 215/571 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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