DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1703 and ABCF5

DIOPT Version :9

Sequence 1:NP_001285130.1 Gene:CG1703 / 32112 FlyBaseID:FBgn0030321 Length:901 Species:Drosophila melanogaster
Sequence 2:NP_201289.1 Gene:ABCF5 / 836607 AraportID:AT5G64840 Length:692 Species:Arabidopsis thaliana


Alignment Length:635 Identity:202/635 - (31%)
Similarity:312/635 - (49%) Gaps:93/635 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 EVDSKFEESKEAKEKKLTHKEKKKQKKQQEYERQMELMTKKGGAGHSDLDNNFTMSQVQKSAGQK 343
            |::|.|                .||..||:.:|:....:.|.||...             |:|  
plant    64 EIESLF----------------SKQPSQQDSDRKRNGKSSKNGASGI-------------SSG-- 97

  Fly   344 AALEQAVDIKIENFTISAKGNDLFVNANLLIAHGRRYGLVGPNGHGKTTLLRHI-------ATRA 401
                    :|:||...|.||..:..:....:..|.:.||||.||.||||.||.|       :...
plant    98 --------VKLENIRKSYKGVTVLKDVTWEVKRGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNV 154

  Fly   402 FAIPPNIDVLLCEQEV-VATDKTAINTILEADVRRTEMLKKADELEKQFVAG--DLTVQEELNDT 463
            ....||:.|....||. |:..||.....:.|.....|:.:|.::::|.....  ||.:...|.|.
plant   155 IKAKPNMKVAFLSQEFEVSMSKTVREEFMTAFKEEMEITEKLEKVQKAIEGSVDDLDLMGRLLDE 219

  Fly   464 FAEL----KAIGAYSAEARARRILAGLGFSKEMQDRPTNKFSGGWRMRVSLARALYLEPTLLMLD 524
            |..|    :|:...|.:|:..:::..|||:.|..||....|||||:||:||.:.|..:|.||:||
plant   220 FDLLQRRAQAVNLDSVDAKISKLMPELGFAPEDADRLVASFSGGWQMRMSLGKILLQDPDLLLLD 284

  Fly   525 EPTNHLDLNAVIWLDNYLQGWKKTLLIVSHDQSFLDNVCNEIIHLDQKKLQYYKGNYSMFKKMYV 589
            ||||||||:.:.||:.|||.....::|:|||::|||.:|.:|:..:....:.::||||    .||
plant   285 EPTNHLDLDTIEWLEGYLQKQDVPMVIISHDRAFLDQLCTKIVETEMGVSRTFEGNYS----QYV 345

  Fly   590 QKRREMIK----EYEKQEKRLRELK---------AHGQSKKAAEKKQKESLTRKQEKNKSKQQKQ 641
            ..:.|.|:    .:|||:|.:...|         |:......||||    |.:.||         
plant   346 ISKAEWIETQNAAWEKQQKDIDSTKDLIARLGAGANSGRASTAEKK----LEKLQE--------- 397

  Fly   642 DEDEGPQELLARP-KEYIVKFRFPEPSQLQPPILGVHNVTFAFPSQKPLFIKVDFGIDLTSRVAI 705
                  |||:.:| :...:|.||||.......::.|.|:.|.| ..|.||.|.:..|:...::||
plant   398 ------QELIEKPFQRKQMKIRFPERGTSGRSVVNVKNIDFGF-EDKMLFKKANLSIERGEKIAI 455

  Fly   706 VGPNGVGKSTFLKLLLGELEPQEGEQ-RKNHRLHVGRFDQHSGEHLTAEESAAEYL-QRLFNLPH 768
            :||||.||||.|||::|..:|.:||. ...|.:....|:|:..|.|..:::..|.: :...:...
plant   456 LGPNGCGKSTLLKLIMGLEKPVKGEVILGEHNVLPNYFEQNQAEVLDLDKTVLETVCEAAEDWRS 520

  Fly   769 EKARKALGSFGLVSHAHTIKMKDLSGGQKARVALAELCLSAPDVLILDEPTNNLDIESIDALAEA 833
            :..:..||.....:.....|:..||||:|||:|..:..::...:|:||||||:|||.|.:.|.||
plant   521 DDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKEMLEEA 585

  Fly   834 INEYEGGVIIVSHDERLIRETGCTLYVIEDQTINEIVGEFDDYRKEVLDS 883
            ||||:|.||.||||...|::....:..:||..:.:..|:::.|.::.||:
plant   586 INEYQGTVIAVSHDRYFIKQIVNRVIEVEDGCLEDYAGDYNYYLEKNLDA 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1703NP_001285130.1 Uup 351..879 CDD:223562 187/557 (34%)
ABCF_EF-3 352..573 CDD:213188 84/234 (36%)
ABC_tran_Xtn 567..>611 CDD:289608 13/56 (23%)
ABCF_EF-3 676..865 CDD:213188 71/190 (37%)
ABCF5NP_201289.1 Uup 99..631 CDD:223562 187/555 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D580544at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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