DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1703 and ABCF1

DIOPT Version :10

Sequence 1:NP_572736.1 Gene:CG1703 / 32112 FlyBaseID:FBgn0030321 Length:901 Species:Drosophila melanogaster
Sequence 2:NP_200887.1 Gene:ABCF1 / 836200 AraportID:AT5G60790 Length:595 Species:Arabidopsis thaliana


Alignment Length:614 Identity:240/614 - (39%)
Similarity:353/614 - (57%) Gaps:54/614 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 KEKKKQKKQQEYERQMELMTKKGGA-------------GHSDLDNNFTMSQV--QKSAGQKAALE 347
            |:|..|||       .....|:||.             |...|.:.....|:  :...|...:..
plant     7 KKKAAQKK-------AAAAAKRGGKAAAPSKSAATSSNGVDSLSSGVDALQISDRTCTGVLCSHP 64

  Fly   348 QAVDIKIENFTISAKGNDLFVNANLLIAHGRRYGLVGPNGHGKTTLLRHIATRAFAIPPNIDVLL 412
            |:.||:||:.:::..|.||.|::.|.:.:||||||:|.||.||:|||..|..|...||..:|:..
plant    65 QSRDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGRREIPIPDQMDIYH 129

  Fly   413 CEQEVVATDKTAINTILEADVRRTEMLKKADELEKQFVAGDLTVQEELNDTFAELKAIGAYSAEA 477
            ...|:.|||.:::..::..|..|..:.|:.:.|.:|...|.    |.|...:..|.|:.|.:||.
plant   130 LSHEIEATDMSSLEAVVSCDEERLRLEKEVEILVQQDDGGG----ERLQSIYERLDAMDAETAEK 190

  Fly   478 RARRILAGLGFSKEMQDRPTNKFSGGWRMRVSLARALYLEPTLLMLDEPTNHLDLNAVIWLDNYL 542
            ||..||.||||.||||.:.|..||||||||::|||||::.||:|:||||||||||.|.:||:..|
plant   191 RAAEILFGLGFDKEMQAKKTKDFSGGWRMRIALARALFIMPTILLLDEPTNHLDLEACVWLEESL 255

  Fly   543 QGWKKTLLIVSHDQSFLDNVCNEIIHLDQKKLQYYKGNYSMFKKMYVQKRREM----IKEYEKQE 603
            :.:.:.|::|||.|.||:.||..|||:..|:|:||.||:.    .|.|.|.|:    :|:|..::
plant   256 KNFDRILVVVSHSQDFLNGVCTNIIHMQSKQLKYYTGNFD----QYCQTRSELEENQMKQYRWEQ 316

  Fly   604 KRLRELK------AHGQSKKAAEKKQKESLTRKQEKNKSKQQKQDEDEGPQELLARPKEYIVKFR 662
            :::..:|      .||.:|.|.:.:.||....|.|:.           |..|.:||  :.::.||
plant   317 EQISHMKEYIARFGHGSAKLARQAQSKEKTLAKMERG-----------GLTEKVAR--DSVLVFR 368

  Fly   663 FPEPSQLQPPILGVHNVTFAFPSQKPLFIKVDFGIDLTSRVAIVGPNGVGKSTFLKLLLGELEPQ 727
            |.:..:|.||:|....|:|.:.....::..:|||:||.||||:|||||.||||.|||:.|||.|.
plant   369 FADVGKLPPPVLQFVEVSFGYTPDYLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGELHPT 433

  Fly   728 EGEQRKNHRLHVGRFDQHSGEHLTAEESAAEYLQRLF-NLPHEKARKALGSFGLVSHAHTIKMKD 791
            ||..|:::.|.:.::.||..|.|..|..|..|:.|.| ....||.|.|:|.|||...|..:.||:
plant   434 EGMVRRHNHLKIAQYHQHLAEKLDLELPALLYMMREFPGTEEEKMRAAIGRFGLTGKAQVMPMKN 498

  Fly   792 LSGGQKARVALAELCLSAPDVLILDEPTNNLDIESIDALAEAINEYEGGVIIVSHDERLIRETGC 856
            ||.||::||..|.|....|::|:||||||:||||:||:||||:||::||:::||||.|||.:...
plant   499 LSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAH 563

  Fly   857 TLYVIEDQTINEIVGEFDDYRKEVLDSLG 885
            .::|.|.|.|.:..|:..|:::.:....|
plant   564 EIWVCEKQCITKWNGDIMDFKRHLKAKAG 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1703NP_572736.1 Uup 354..878 CDD:440254 224/534 (42%)
ABCF1NP_200887.1 PLN03073 <64..589 CDD:215558 227/545 (42%)

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