DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG1703 and ABCF1

DIOPT Version :9

Sequence 1:	NP_001285130.1	Gene:	CG1703 / 32112	FlyBaseID:	FBgn0030321	Length:	901	Species:	Drosophila melanogaster
Sequence 2:	NP_200887.1	Gene:	ABCF1 / 836200	AraportID:	AT5G60790	Length:	595	Species:	Arabidopsis thaliana

Alignment Length:	614	Identity:	240/614 - (39%)
Similarity:	353/614 - (57%)	Gaps:	54/614 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly   298 KEKKKQKKQQEYERQMELMTKKGGA-------------GHSDLDNNFTMSQV--QKSAGQKAALE 347
            |:|..|||       .....|:||.             |...|.:.....|:  :...|...:..
plant     7 KKKAAQKK-------AAAAAKRGGKAAAPSKSAATSSNGVDSLSSGVDALQISDRTCTGVLCSHP 64

  Fly   348 QAVDIKIENFTISAKGNDLFVNANLLIAHGRRYGLVGPNGHGKTTLLRHIATRAFAIPPNIDVLL 412
            |:.||:||:.:::..|.||.|::.|.:.:||||||:|.||.||:|||..|..|...||..:|:..
plant    65 QSRDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGRREIPIPDQMDIYH 129

  Fly   413 CEQEVVATDKTAINTILEADVRRTEMLKKADELEKQFVAGDLTVQEELNDTFAELKAIGAYSAEA 477
            ...|:.|||.:::..::..|..|..:.|:.:.|.:|...|.    |.|...:..|.|:.|.:||.
plant   130 LSHEIEATDMSSLEAVVSCDEERLRLEKEVEILVQQDDGGG----ERLQSIYERLDAMDAETAEK 190

  Fly   478 RARRILAGLGFSKEMQDRPTNKFSGGWRMRVSLARALYLEPTLLMLDEPTNHLDLNAVIWLDNYL 542
            ||..||.||||.||||.:.|..||||||||::|||||::.||:|:||||||||||.|.:||:..|
plant   191 RAAEILFGLGFDKEMQAKKTKDFSGGWRMRIALARALFIMPTILLLDEPTNHLDLEACVWLEESL 255

  Fly   543 QGWKKTLLIVSHDQSFLDNVCNEIIHLDQKKLQYYKGNYSMFKKMYVQKRREM----IKEYEKQE 603
            :.:.:.|::|||.|.||:.||..|||:..|:|:||.||:.    .|.|.|.|:    :|:|..::
plant   256 KNFDRILVVVSHSQDFLNGVCTNIIHMQSKQLKYYTGNFD----QYCQTRSELEENQMKQYRWEQ 316

  Fly   604 KRLRELK------AHGQSKKAAEKKQKESLTRKQEKNKSKQQKQDEDEGPQELLARPKEYIVKFR 662
            :::..:|      .||.:|.|.:.:.||....|.|:.           |..|.:||  :.::.||
plant   317 EQISHMKEYIARFGHGSAKLARQAQSKEKTLAKMERG-----------GLTEKVAR--DSVLVFR 368

  Fly   663 FPEPSQLQPPILGVHNVTFAFPSQKPLFIKVDFGIDLTSRVAIVGPNGVGKSTFLKLLLGELEPQ 727
            |.:..:|.||:|....|:|.:.....::..:|||:||.||||:|||||.||||.|||:.|||.|.
plant   369 FADVGKLPPPVLQFVEVSFGYTPDYLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGELHPT 433

  Fly   728 EGEQRKNHRLHVGRFDQHSGEHLTAEESAAEYLQRLF-NLPHEKARKALGSFGLVSHAHTIKMKD 791
            ||..|:::.|.:.::.||..|.|..|..|..|:.|.| ....||.|.|:|.|||...|..:.||:
plant   434 EGMVRRHNHLKIAQYHQHLAEKLDLELPALLYMMREFPGTEEEKMRAAIGRFGLTGKAQVMPMKN 498

  Fly   792 LSGGQKARVALAELCLSAPDVLILDEPTNNLDIESIDALAEAINEYEGGVIIVSHDERLIRETGC 856
            ||.||::||..|.|....|::|:||||||:||||:||:||||:||::||:::||||.|||.:...
plant   499 LSDGQRSRVIFAWLAYKQPNMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAH 563

  Fly   857 TLYVIEDQTINEIVGEFDDYRKEVLDSLG 885
            .::|.|.|.|.:..|:..|:::.:....|
plant   564 EIWVCEKQCITKWNGDIMDFKRHLKAKAG 592

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG1703	NP_001285130.1	Uup	351..879	CDD:223562	226/538 (42%)
		ABCF_EF-3	352..573	CDD:213188	99/220 (45%)
		ABC_tran_Xtn	567..>611	CDD:289608	15/53 (28%)
		ABCF_EF-3	676..865	CDD:213188	90/189 (48%)
ABCF1	NP_200887.1	Uup	66..584	CDD:223562	226/538 (42%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0488
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53504
OrthoDB	1	1.010	-	-		D580544at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.830