DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG1703 and ABCF4

DIOPT Version :9

Sequence 1:	NP_001285130.1	Gene:	CG1703 / 32112	FlyBaseID:	FBgn0030321	Length:	901	Species:	Drosophila melanogaster
Sequence 2:	NP_001327731.1	Gene:	ABCF4 / 824619	AraportID:	AT3G54540	Length:	723	Species:	Arabidopsis thaliana

Alignment Length:	718	Identity:	302/718 - (42%)
Similarity:	446/718 - (62%)	Gaps:	54/718 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly   210 KEQLSNKAAKESKKEQQKQPEKEVEEQKVEQVLSEKVAAVSLKEKTPE----PVPKAEPEPESE- 269
            |::....||....|...|...|:.:::|:.  :|..:|.:..|:..|:    ...||.|:..|.
plant     3 KKKSDESAATTKVKPSGKDASKDSKKEKLS--VSAMLAGMDQKDDKPKKGSSSRTKAAPKSTSYT 65

  Fly   270 -----PQPDEEADAEVDSKFEESKEAKEK----------KLTHKEKKKQKKQQEYERQMELMTKK 319
                 |..|||.|.|.|.: |..|||:.|          .:|.||:||::.::....|.....|:
plant    66 DGIDLPPSDEEDDGESDEE-ERQKEARRKLKSEQRHLEISVTDKEQKKREAKERLALQAAESAKR 129

  Fly   320 GGAGHSDLDNNFTM---SQVQKSAGQKAALEQAVDIKIENFTISAKGNDLFVNANLLIAHGRRYG 381
              ....|..:.||:   |:.....|...|.....||.||:|::||:|.:|..||::.|:||:|||
plant   130 --EAMKDDHDAFTVVIGSKTSVLEGDDMADANVKDITIESFSVSARGKELLKNASVRISHGKRYG 192

  Fly   382 LVGPNGHGKTTLLRHIATRAFAIPPNIDVLLCEQEVVATDKTAINTILEADVRRTEMLKKADELE 446
            |:||||.||:|||:.:|.|...:|.||||||.|||||..:|:|:|.::.|:....::.::|:.|:
plant   193 LIGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDEKSALNAVVSANEELVKLREEAEALQ 257

  Fly   447 K-------QFVAG--DLTVQEELNDTFAELKAIGAYSAEARARRILAGLGFSKEMQDRPTNKFSG 502
            |       :.|.|  |....|:|.:.:..|:.:|:.:|||:|.:|||||||:|:||.|.|..|||
plant   258 KSSSGADGENVDGEDDDDTGEKLAELYDRLQILGSDAAEAQASKILAGLGFTKDMQVRATQSFSG 322

  Fly   503 GWRMRVSLARALYLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWKKTLLIVSHDQSFLDNVCNEII 567
            |||||:||||||:::||||:||||||||||.||:||:.||..|||||::||||:.||:.||.|||
plant   323 GWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEII 387

  Fly   568 HLDQKKLQYYKGNYSMFKKMYVQKRREMIKEYEKQEKRLRELKAHGQSKKAAEKKQKESLTRKQE 632
            ||..:.|.:|:||:..|:..|.|:|:||.|:::..:|:::..|..|...:..:.|.:...|..:|
plant   388 HLHDQNLHFYRGNFDGFESGYEQRRKEMNKKFDVYDKQMKAAKRTGNRGQQEKVKDRAKFTAAKE 452

  Fly   633 KNKSKQQ-KQDEDEGP-QELLARPKEYIVKFRFPEPSQLQPPILGVHNVTFAFPSQKPLF--IKV 693
            .:|||.: |..::||| .|...:.::|.|.|.||||::|.||:|.:..|:|::|: :|.|  ..|
plant   453 ASKSKSKGKTVDEEGPAPEAPRKWRDYSVVFHFPEPTELTPPLLQLIEVSFSYPN-RPDFRLSNV 516

  Fly   694 DFGIDLTSRVAIVGPNGVGKSTFLKLLLGELEPQEGEQRKNHRLHVGRFDQHSGEHLTAEESAAE 758
            |.|||:.:|||||||||.||||.|.||.|:|.|.|||.|::.:|.:||:.||..:.||..|:..:
plant   517 DVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEMRRSQKLRIGRYSQHFVDLLTMGETPVQ 581

  Fly   759 YLQRL------FNLPHEKARKALGSFGLVSHAHTIKMKDLSGGQKARVALAELCLSAPDVLILDE 817
            ||.||      |: ..|..|..||.|||.||.|...:..|||||||||....:.:|.|.:|:|||
plant   582 YLLRLHPDQEGFS-KQEAVRAKLGKFGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDE 645

  Fly   818 PTNNLDIESIDALAEAINEYEGGVIIVSHDERLI-----RETGCTLYVIEDQTINEIVGEFDDYR 877
            |||:||::||||||:|::|:.|||::||||.|||     .|....::|:||.|:|...|.|::|:
plant   646 PTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCAEEEKSQIWVVEDGTVNFFPGTFEEYK 710

  Fly   878 KEV 880
            :::
plant   711 EDL 713

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG1703	NP_001285130.1	Uup	351..879	CDD:223562	262/551 (48%)
		ABCF_EF-3	352..573	CDD:213188	122/229 (53%)
		ABC_tran_Xtn	567..>611	CDD:289608	15/43 (35%)
		ABCF_EF-3	676..865	CDD:213188	98/201 (49%)
ABCF4	NP_001327731.1	PLN03073	45..714	CDD:215558	292/674 (43%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	167	1.000	Domainoid score	I1195
eggNOG	1	0.900	-	-		E1_COG0488
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H849
Inparanoid	1	1.050	522	1.000	Inparanoid score	I291
OMA	1	1.010	-	-		QHG53504
OrthoDB	1	1.010	-	-		D580544at2759
OrthoFinder	1	1.000	-	-		FOG0006074
OrthoInspector	1	1.000	-	-		oto3705
orthoMCL	1	0.900	-	-		OOG6_104427
Panther	1	1.100	-	-	LDO	PTHR19211
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X4371
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	14	13.840