DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1703 and Abcf3

DIOPT Version :9

Sequence 1:NP_001285130.1 Gene:CG1703 / 32112 FlyBaseID:FBgn0030321 Length:901 Species:Drosophila melanogaster
Sequence 2:NP_038880.1 Gene:Abcf3 / 27406 MGIID:1351656 Length:709 Species:Mus musculus


Alignment Length:648 Identity:245/648 - (37%)
Similarity:366/648 - (56%) Gaps:58/648 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 AEPEPESEPQPDEEADAEV---------DSKF------EESKEAKEKKLTHKEKKKQKKQQEYER 311
            |||:.:...|...:|..::         |:|.      |:|.....|||...|.:.:.||::...
Mouse    75 AEPQNQGNSQVLLDAPIQLSKIMENYDCDTKLPGLLKREQSSTVNAKKLEKAEARLKAKQEKRSE 139

  Fly   312 QMELMTKKGGAGHSDLDNNFTMSQVQKS-AG--QKAALE-----QAVDIKIENFTISAKGNDLFV 368
            :..|.|          .|...:.:...| ||  :::.||     ::.|::||||.:|.....|..
Mouse   140 KETLKT----------SNPLVLEEASASQAGSRKESRLESSGKNKSYDVRIENFDVSFGDRVLLA 194

  Fly   369 NANLLIAHGRRYGLVGPNGHGKTTLLRHIATRAFAIPPNIDVLLCEQEVVATDKTAINTILEADV 433
            .|::.:|.||||||||.||.||||||:.:|||:..:|.:|.:|..||||...|..|:.::||:|.
Mouse   195 GADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISLLHVEQEVAGDDTPALQSVLESDT 259

  Fly   434 RRTEMLKKADELEKQFVAGDLTVQE--ELNDTFAELKAIGAYSAEARARRILAGLGFSKEMQDRP 496
            .|.::|::..||..:..||.....|  :|.:.:.:|:.|.|..|.|||..|||||||:.:||.:|
Mouse   260 VREDLLRQERELSLRIAAGRAEGSEAAQLAEIYGKLEEIEADKAPARASVILAGLGFTPKMQQQP 324

  Fly   497 TNKFSGGWRMRVSLARALYLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWKKTLLIVSHDQSFLDN 561
            |.:||||||||::|||||:..|.||:||||||.||:.|::||:||||.|..|:|:||||::||:.
Mouse   325 TREFSGGWRMRLALARALFARPDLLLLDEPTNMLDVRAILWLENYLQTWPSTILVVSHDRNFLNA 389

  Fly   562 VCNEIIHLDQKKLQYYKGNYSMFKKMYVQKRREMIKEYEKQEKRLRELKA-----HGQSKKAAEK 621
            :..:||||..::|..|:|::..|.|...::.....:|||.|::..:.::.     ...:.:|::.
Mouse   390 IATDIIHLHSQRLDGYRGDFETFIKSKQERLLNQQREYEAQQQYRQHIQVFIDRFRYNANRASQV 454

  Fly   622 KQKESLTRKQEKNKSKQQKQDEDEGPQELLARPKEYIVKFRFPEP-SQLQPPILGVHNVTFAFPS 685
            :.|..:..|.                .||....||..|..:||:. .:..||||.:..|.|.:..
Mouse   455 QSKLKMLEKL----------------PELKPVDKESEVVLKFPDGFEKFSPPILQLDEVDFYYDP 503

  Fly   686 QKPLFIKVDFGIDLTSRVAIVGPNGVGKSTFLKLLLGELEPQEGEQRKNHRLHVGRFDQHSGEHL 750
            :..:|.::....||.||:.:||.||.||||.||||:|:|.|..|.:..:..|.:|.|.||..|.|
Mouse   504 KHSIFSRLSVSADLESRICVVGENGAGKSTMLKLLMGDLSPVRGIRHAHRNLKIGYFSQHHVEQL 568

  Fly   751 TAEESAAEYLQRLF-NLPHEKARKALGSFGLVSHAHTIKMKDLSGGQKARVALAELCLSAPDVLI 814
            ....||.|.|.|.| .||.|:.|..||.:|:........:..||||||:|||.|::.:..|:..|
Mouse   569 DLNVSAVELLARKFPGLPEEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTMPCPNFYI 633

  Fly   815 LDEPTNNLDIESIDALAEAINEYEGGVIIVSHDERLIRETGCTLYVIEDQTINEIVGEFDDYR 877
            ||||||:||:|:|:||.:|:|.:.||||:||||||.||.....|:|.|:.::..:.|.||.||
Mouse   634 LDEPTNHLDMETIEALGQALNNFRGGVILVSHDERFIRLVCKELWVCENGSVTRVEGGFDQYR 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1703NP_001285130.1 Uup 351..879 CDD:223562 222/536 (41%)
ABCF_EF-3 352..573 CDD:213188 109/222 (49%)
ABC_tran_Xtn 567..>611 CDD:289608 12/43 (28%)
ABCF_EF-3 676..865 CDD:213188 84/189 (44%)
Abcf3NP_038880.1 PLN03073 6..700 CDD:215558 245/648 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 129..171 10/51 (20%)
ABCF_EF-3 178..401 CDD:213188 109/222 (49%)
P-loop_NTPase 266..>363 CDD:304359 48/96 (50%)
ABC_tran_Xtn 395..477 CDD:289608 19/97 (20%)
ABCF_EF-3 492..683 CDD:213188 85/190 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

Return to query results.
Submit another query.