DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1703 and Abcf3

DIOPT Version :10

Sequence 1:NP_572736.1 Gene:CG1703 / 32112 FlyBaseID:FBgn0030321 Length:901 Species:Drosophila melanogaster
Sequence 2:NP_038880.1 Gene:Abcf3 / 27406 MGIID:1351656 Length:709 Species:Mus musculus


Alignment Length:648 Identity:245/648 - (37%)
Similarity:366/648 - (56%) Gaps:58/648 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 AEPEPESEPQPDEEADAEV---------DSKF------EESKEAKEKKLTHKEKKKQKKQQEYER 311
            |||:.:...|...:|..::         |:|.      |:|.....|||...|.:.:.||::...
Mouse    75 AEPQNQGNSQVLLDAPIQLSKIMENYDCDTKLPGLLKREQSSTVNAKKLEKAEARLKAKQEKRSE 139

  Fly   312 QMELMTKKGGAGHSDLDNNFTMSQVQKS-AG--QKAALE-----QAVDIKIENFTISAKGNDLFV 368
            :..|.|          .|...:.:...| ||  :::.||     ::.|::||||.:|.....|..
Mouse   140 KETLKT----------SNPLVLEEASASQAGSRKESRLESSGKNKSYDVRIENFDVSFGDRVLLA 194

  Fly   369 NANLLIAHGRRYGLVGPNGHGKTTLLRHIATRAFAIPPNIDVLLCEQEVVATDKTAINTILEADV 433
            .|::.:|.||||||||.||.||||||:.:|||:..:|.:|.:|..||||...|..|:.::||:|.
Mouse   195 GADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISLLHVEQEVAGDDTPALQSVLESDT 259

  Fly   434 RRTEMLKKADELEKQFVAGDLTVQE--ELNDTFAELKAIGAYSAEARARRILAGLGFSKEMQDRP 496
            .|.::|::..||..:..||.....|  :|.:.:.:|:.|.|..|.|||..|||||||:.:||.:|
Mouse   260 VREDLLRQERELSLRIAAGRAEGSEAAQLAEIYGKLEEIEADKAPARASVILAGLGFTPKMQQQP 324

  Fly   497 TNKFSGGWRMRVSLARALYLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWKKTLLIVSHDQSFLDN 561
            |.:||||||||::|||||:..|.||:||||||.||:.|::||:||||.|..|:|:||||::||:.
Mouse   325 TREFSGGWRMRLALARALFARPDLLLLDEPTNMLDVRAILWLENYLQTWPSTILVVSHDRNFLNA 389

  Fly   562 VCNEIIHLDQKKLQYYKGNYSMFKKMYVQKRREMIKEYEKQEKRLRELKA-----HGQSKKAAEK 621
            :..:||||..::|..|:|::..|.|...::.....:|||.|::..:.::.     ...:.:|::.
Mouse   390 IATDIIHLHSQRLDGYRGDFETFIKSKQERLLNQQREYEAQQQYRQHIQVFIDRFRYNANRASQV 454

  Fly   622 KQKESLTRKQEKNKSKQQKQDEDEGPQELLARPKEYIVKFRFPEP-SQLQPPILGVHNVTFAFPS 685
            :.|..:..|.                .||....||..|..:||:. .:..||||.:..|.|.:..
Mouse   455 QSKLKMLEKL----------------PELKPVDKESEVVLKFPDGFEKFSPPILQLDEVDFYYDP 503

  Fly   686 QKPLFIKVDFGIDLTSRVAIVGPNGVGKSTFLKLLLGELEPQEGEQRKNHRLHVGRFDQHSGEHL 750
            :..:|.::....||.||:.:||.||.||||.||||:|:|.|..|.:..:..|.:|.|.||..|.|
Mouse   504 KHSIFSRLSVSADLESRICVVGENGAGKSTMLKLLMGDLSPVRGIRHAHRNLKIGYFSQHHVEQL 568

  Fly   751 TAEESAAEYLQRLF-NLPHEKARKALGSFGLVSHAHTIKMKDLSGGQKARVALAELCLSAPDVLI 814
            ....||.|.|.|.| .||.|:.|..||.:|:........:..||||||:|||.|::.:..|:..|
Mouse   569 DLNVSAVELLARKFPGLPEEEYRHQLGRYGISGELAMRPVASLSGGQKSRVAFAQMTMPCPNFYI 633

  Fly   815 LDEPTNNLDIESIDALAEAINEYEGGVIIVSHDERLIRETGCTLYVIEDQTINEIVGEFDDYR 877
            ||||||:||:|:|:||.:|:|.:.||||:||||||.||.....|:|.|:.::..:.|.||.||
Mouse   634 LDEPTNHLDMETIEALGQALNNFRGGVILVSHDERFIRLVCKELWVCENGSVTRVEGGFDQYR 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1703NP_572736.1 Uup 354..878 CDD:440254 221/533 (41%)
Abcf3NP_038880.1 PLN03073 6..700 CDD:215558 245/648 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 129..171 10/51 (20%)

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