DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1703 and abcf-1

DIOPT Version :9

Sequence 1:NP_001285130.1 Gene:CG1703 / 32112 FlyBaseID:FBgn0030321 Length:901 Species:Drosophila melanogaster
Sequence 2:NP_506192.1 Gene:abcf-1 / 179748 WormBaseID:WBGene00006512 Length:622 Species:Caenorhabditis elegans


Alignment Length:614 Identity:336/614 - (54%)
Similarity:451/614 - (73%) Gaps:19/614 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 KKLTHKEKKKQKKQQEYERQMELM--------------TKKGGAGH-SDLDNNFTMSQVQKSAGQ 342
            ||::.||.||.|.::.|::.:..|              .:.||.|. ::|..:||:||:.|:..|
 Worm     6 KKISRKEAKKAKAKENYDKTILSMGGVVENLPEVEGDQEEHGGIGSGAELGAHFTVSQLSKTGTQ 70

  Fly   343 KAALEQAVDIKIENFTISAKGNDLFVNANLLIAHGRRYGLVGPNGHGKTTLLRHIATRAFAIPPN 407
            .|.:|.::|||||||.|||:|..||..|:|.|.:|||||||||||.||||||:||..|..|||.:
 Worm    71 LAQMENSMDIKIENFDISAQGKLLFDKASLTIVYGRRYGLVGPNGMGKTTLLKHIGARKLAIPSH 135

  Fly   408 IDVLLCEQEVVATDKTAINTILEADVRRTEMLKKADELEKQFVAGDLTVQEELNDTFAELKAIGA 472
            ||:|.||||:.....:||:|::::|.:|..:|::..:|..:...|.....|.:.:...||:.|||
 Worm   136 IDLLYCEQEIQVDSTSAIDTVVKSDKKRLALLEEEAKLMSEIEEGKTEAAERMKEVADELRDIGA 200

  Fly   473 YSAEARARRILAGLGFSKEMQDRPTNKFSGGWRMRVSLARALYLEPTLLMLDEPTNHLDLNAVIW 537
            .|||.||||||||||||||||::|...||||||||:||||||:||||||||||||||||||||||
 Worm   201 DSAEPRARRILAGLGFSKEMQEKPCTDFSGGWRMRISLARALFLEPTLLMLDEPTNHLDLNAVIW 265

  Fly   538 LDNYLQGWKKTLLIVSHDQSFLDNVCNEIIHLDQKKLQYYKGNYSMFKKMYVQKRREMIKEYEKQ 602
            ||||||.||||||||||||.|||:||.:|||||.:||..|:|||::|||.|.|..:...|.:::|
 Worm   266 LDNYLQTWKKTLLIVSHDQGFLDSVCTDIIHLDNQKLHTYRGNYTLFKKQYAQDMQVHEKNFDQQ 330

  Fly   603 EKRLRELKAHGQSKKAAEKKQKESLTRKQEKNKSK---QQKQDEDEGPQELLARPKEYIVKFRFP 664
            :|:|:.:|..|:|.|.||::.|:.:..|.:|...|   :...|:|.|..|||.|.|||.|||:||
 Worm   331 QKQLKAMKKEGKSAKQAEEQVKQQMANKAKKGGKKNAGKVNDDDDAGAPELLQRRKEYSVKFQFP 395

  Fly   665 EPSQLQPPILGVHNVTFAFPSQKPLFIKVDFGIDLTSRVAIVGPNGVGKSTFLKLLLGELEPQEG 729
            |.::|.||:||:|:|.|.: .:..||.|::||:|:.||:||||||||||||.||||:|:::|.:|
 Worm   396 ETTKLNPPVLGLHDVNFGY-GKDVLFKKLNFGVDMDSRIAIVGPNGVGKSTLLKLLIGKIDPNDG 459

  Fly   730 EQRKNHRLHVGRFDQHSGEHLTAEESAAEYLQRLFNLPHEKARKALGSFGLVSHAHTIKMKDLSG 794
            |.||:..|.:|.||||:.|.|..|::..|:|...||:.:::|||.||:.||.:||||:|:|||||
 Worm   460 ELRKHRTLRIGWFDQHANEALNGEQTPVEFLCTKFNIDYQEARKQLGTTGLAAHAHTVKIKDLSG 524

  Fly   795 GQKARVALAELCLSAPDVLILDEPTNNLDIESIDALAEAINEYEGGVIIVSHDERLIRETGCTLY 859
            |||:||||..|.|..||::|||||||||||||||||||||.::.|||::|:|||||:..|.|.|:
 Worm   525 GQKSRVALCNLALGGPDIIILDEPTNNLDIESIDALAEAIRDFNGGVVMVTHDERLVVRTDCNLW 589

  Fly   860 VIEDQTINEIVGEFDDYRKEVLDSLGEVV 888
            |:|:|.|:||.|:|:||:|||||:|||.:
 Worm   590 VVENQGIDEIDGDFEDYKKEVLDALGEAL 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1703NP_001285130.1 Uup 351..879 CDD:223562 307/530 (58%)
ABCF_EF-3 352..573 CDD:213188 143/220 (65%)
ABC_tran_Xtn 567..>611 CDD:289608 19/43 (44%)
ABCF_EF-3 676..865 CDD:213188 109/188 (58%)
abcf-1NP_506192.1 Uup 77..609 CDD:223562 307/532 (58%)
ABCF_EF-3 80..301 CDD:213188 143/220 (65%)
ABC_tran_Xtn 295..>353 CDD:289608 25/57 (44%)
ABCF_EF-3 407..595 CDD:213188 109/188 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166692
Domainoid 1 1.000 190 1.000 Domainoid score I1933
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H849
Inparanoid 1 1.050 671 1.000 Inparanoid score I382
Isobase 1 0.950 - 0 Normalized mean entropy S789
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 1 1.000 - - FOG0006074
OrthoInspector 1 1.000 - - oto18120
orthoMCL 1 0.900 - - OOG6_104427
Panther 1 1.100 - - LDO PTHR19211
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3772
SonicParanoid 1 1.000 - - X4371
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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