DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1703 and abcf2b

DIOPT Version :9

Sequence 1:NP_001285130.1 Gene:CG1703 / 32112 FlyBaseID:FBgn0030321 Length:901 Species:Drosophila melanogaster
Sequence 2:NP_001188290.1 Gene:abcf2b / 100000576 ZFINID:ZDB-GENE-050506-58 Length:616 Species:Danio rerio


Alignment Length:619 Identity:239/619 - (38%)
Similarity:358/619 - (57%) Gaps:47/619 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 KEAKEKKLTHKEKKKQKKQQEYERQMELM------TKKGGAGHSDLD------NNFTMSQVQKSA 340
            |:|.:||...|.:::.||..|.....||.      .:..|..:.|:.      :.|.|.:.:..|
Zfish     8 KKAAKKKEAAKARQRAKKHDEVNGDGELQDDPVNDAETNGDANGDVAALSKELDEFEMRKTEARA 72

  Fly   341 --GQKAALEQAVDIKIENFTISAKGNDLFVNANLLIAHGRRYGLVGPNGHGKTTLLRHIATRAFA 403
              |..|:...:.|:.|.:.:::..|.:|..:.:|.:..||||||:|.||.||:.||..|..|...
Zfish    73 VTGVLASHPNSTDVHISSLSLTFHGQELLSDTSLELNSGRRYGLIGLNGTGKSMLLSAIGHREVP 137

  Fly   404 IPPNIDVLLCEQEVVATDKTAINTILEADVRRTEMLKKADELEKQFVAGDLTVQEELNDTFAELK 468
            ||.:||:....:|:..::|||:..::|.|..|.::.|:|:.|     |.:.:..|:|.:.:..|:
Zfish   138 IPEHIDIFHLTREMAPSEKTALQCVMEVDEERIKLEKEAERL-----AHEDSECEKLMEIYERLE 197

  Fly   469 AIGAYSAEARARRILAGLGFSKEMQDRPTNKFSGGWRMRVSLARALYLEPTLLMLDEPTNHLDLN 533
            .:.|..||.||.|||.||||:..||.:....|||||||||||||||:::|.:|:||||||||||:
Zfish   198 ELDADKAEVRASRILFGLGFTPAMQRKKLKDFSGGWRMRVSLARALFIKPFMLLLDEPTNHLDLD 262

  Fly   534 AVIWLDNYLQGWKKTLLIVSHDQSFLDNVCNEIIHLDQKKLQYYKGNYSMFKKMYVQKRREMIKE 598
            |.:||:..|:.:|:.|:::||.|.||:.||..||||.|:||:||.|||..:.|...:.....:|.
Zfish   263 ACVWLEEELKSFKRILVLISHSQDFLNGVCTNIIHLHQRKLKYYTGNYDQYVKTREELEENQMKR 327

  Fly   599 YEKQEKRLRELK------AHGQSKKAAEKKQKESLTRKQEKNKSKQQKQDEDEGPQELLAR-PKE 656
            |..::.::..:|      .||.:|.|.:.:.||...:|...:              .|.|| ..:
Zfish   328 YNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLQKMVAS--------------GLTARVMND 378

  Fly   657 YIVKFRFPEPSQLQPPILGVHNVTFAFPSQKPLFIK-VDFGIDLTSRVAIVGPNGVGKSTFLKLL 720
            ..:.|.||....:.||::.|.||:|.:.|...:..| ::|||||.:|||:|||||.||||.||||
Zfish   379 KTLSFYFPPCGTIPPPVIMVQNVSFRYSSDTQIIYKNLEFGIDLDTRVALVGPNGAGKSTLLKLL 443

  Fly   721 LGELEPQEGEQRKNHRLHVGRFDQHSGEHLTAEESAAEYLQRLFNLPH----EKARKALGSFGLV 781
            :|||.|.:|..||:..:.:||:.||..|.|..:.|..||:.:.|  |.    |:.||.:|.:||.
Zfish   444 MGELLPTDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYMMKCF--PEIKEKEEMRKIIGCYGLT 506

  Fly   782 SHAHTIKMKDLSGGQKARVALAELCLSAPDVLILDEPTNNLDIESIDALAEAINEYEGGVIIVSH 846
            .......:::||.|||.||..|.|....|.:|.||||||:||||:||||||||||:|||:::|||
Zfish   507 GKQQVSPIRNLSDGQKCRVCFAWLAWQNPHMLFLDEPTNHLDIETIDALAEAINEFEGGMMLVSH 571

  Fly   847 DERLIRETGCTLYVIEDQTINEIVGEFDDYRKEV 880
            |.|||::....::|.|.|||.:..|:...|::.:
Zfish   572 DFRLIQQVAQEIWVCEKQTITKWKGDILAYKEHL 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1703NP_001285130.1 Uup 351..879 CDD:223562 222/539 (41%)
ABCF_EF-3 352..573 CDD:213188 96/220 (44%)
ABC_tran_Xtn 567..>611 CDD:289608 15/49 (31%)
ABCF_EF-3 676..865 CDD:213188 94/193 (49%)
abcf2bNP_001188290.1 Uup 83..603 CDD:223562 222/540 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53504
OrthoDB 1 1.010 - - D249617at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.830

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