DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB1 and ftz

DIOPT Version :9

Sequence 1:NP_002135.2 Gene:HOXB1 / 3211 HGNCID:5111 Length:301 Species:Homo sapiens
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:350 Identity:91/350 - (26%)
Similarity:126/350 - (36%) Gaps:100/350 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    22 YSAHS-APTSFPPSSAQAVDSYASEGRYGGGLSSPAFQQNSGY------------PAQQP----- 68
            |..|| .||.:..|.:.|.  |.:...|.|.....::.::..|            |..||     
  Fly    22 YHPHSLPPTYYDNSGSNAY--YQNTSNYQGYYPQESYSESCYYYNNQEQVTTQTVPPVQPTTPPP 84

Human    69 ---------------------PSTL--------------------GVPFPSSAPSGYAPAACSPS 92
                                 ||||                    .|.....||:.......||:
  Fly    85 KATKRKAEDDAASIIAAVEERPSTLRALLTNPVKKLKYTPDYFYTTVEQVKKAPAVSTKVTASPA 149

Human    93 YGPSQYY---PLGQSEGDGGYFHPSSYGAQLGGLSDGYGAGGAGPGPYPPQH-PPYGNEQTASFA 153
            ....|.|   |...:..|..|....|..:|...|.:|   ..|.|.|..|.. ||.....|...:
  Fly   150 PSYDQEYVTVPTPSASEDVDYLDVYSPQSQTQKLKNG---DFATPPPTTPTSLPPLEGISTPPQS 211

Human   154 PA--YADLLSEDKETPCPSEPNTPTARTFDWMKVKRNPPKTAKVSEPGLGSPSGLRTNFTTRQLT 216
            |.  .:..:|::......:.||  .|..|:|..::.......|.|:       ..|..:|..|..
  Fly   212 PGEKSSSAVSQEINHRIVTAPN--GAGDFNWSHIEETLASDCKDSK-------RTRQTYTRYQTL 267

Human   217 ELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREEGRVPPAPPGC------ 275
            |||||||||:|::|.||::||..|.|:|.|:||||||||||.||    :..:..:|..|      
  Fly   268 ELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKK----DRTLDSSPEHCGAGYTA 328

Human   276 ---PKEAAGDASDQSTCTSPEASPS 297
               |.||        |.|:...:||
  Fly   329 MLPPLEA--------TSTATTGAPS 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB1NP_002135.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..77 19/113 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..149 6/22 (27%)
Antp-type hexapeptide 179..184 2/4 (50%)
Homeobox 207..259 CDD:278475 32/51 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 254..301 14/52 (27%)
ftzNP_477498.1 FTZ 1..248 CDD:281812 46/232 (20%)
Homeobox 257..310 CDD:278475 32/52 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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