DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-4 and RHBDL1

DIOPT Version :10

Sequence 1:NP_525084.1 Gene:rho-4 / 32109 FlyBaseID:FBgn0030318 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_016879338.1 Gene:RHBDL1 / 9028 HGNCID:10007 Length:469 Species:Homo sapiens


Alignment Length:426 Identity:108/426 - (25%)
Similarity:164/426 - (38%) Gaps:108/426 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VKTVNRQQSQT-PAQQLQLQQQRDVENGLYPTIPAERRS--------------PPSRPQTLRQDT 52
            :|...|:|:.| |..|...:.:.|..:...|.:.:..|:              .|.....:..||
Human    28 IKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWSRGRARTQALAGGSSLQQLDPENTGFIGADT 92

  Fly    53 ----IDMEEIPLNQTNSQEPEDRRKMHEIFDKHDSDRDGLINTHELKELISDGYCRDIPAYIAD- 112
                :...|:||         |..|:..:.....|:..|.:...||.:|||..........||: 
Human    93 FTGLVHSHELPL---------DPAKLDMLVALAQSNEQGQVCYQELVDLISSKRSSSFKRAIANG 148

  Fly   113 -QILKRSDQDNDGHLDFEEFYAMSLRHKWMVRNMLTRYCRYVVPPPKPLEGDEPDGAYEKQMSIC 176
             :.|.|     ||.||....            .:..|:.|||.....|.|.|.....|..:.  |
Human   149 QRALPR-----DGPLDEPGL------------GVYKRFVRYVAYEILPCEVDRRWYFYRHRS--C 194

  Fly   177 PPPLTMVLFSIIEIIMFL----------VDVIHFQDDPNYQDRIGESTSGPAATLFIYNPYKRYE 231
            |||:.|...::.:||:||          :...|    |.|.       ..|    .:|:|..|..
Human   195 PPPVFMASVTLAQIIVFLCYGARLNKWVLQTYH----PEYM-------KSP----LVYHPGHRAR 244

  Fly   232 GWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVGLVYLAGVLAGSMGTSLTSPRIFLA 296
            .|||::|||:|||:..|..|.::|:.:|:.||:||...|:.|:||||||| .:|....|.::...
Human   245 AWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGLLRISLLYLAGVLA-ELGWDEMSLQVAED 308

  Fly   297 GASGGVYALI--TAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVYRHLT-------DQHDQ 352
            ||..||:.|.  ...:|.::...:.                  ||.:...|..       .:|..
Human   309 GAGLGVHELRGGPGRVAALLPAAAR------------------LGPTAQLHGAPGRRGGGGEHGP 355

  Fly   353 IGYVAHLSGAVAG---LLVGIGVLRNLEVRRWERIL 385
             .:.|.|.||.||   |:.|...||:|...|  |:|
Human   356 -DHPAELRGAPAGPVRLVGGAAGLRHLPALR--RLL 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-4NP_525084.1 FRQ1 <49..131 CDD:444056 22/87 (25%)
Rhomboid 226..374 CDD:426384 48/159 (30%)
RHBDL1XP_016879338.1 Rhomboid 239..>294 CDD:451297 26/54 (48%)

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