Protein Alignment rho-4 and PCP1

DIOPT Version :9

• Sequence 1: NP_525084.1
• Gene: rho-4 / 32109
• FlyBaseID: FBgn0030318
• Length: 417
• Species: Drosophila melanogaster
• Sequence 2: NP_011615.1
• Gene: PCP1 / 852993
• SGDID: S000003333
• Length: 346
• Species: Saccharomyces cerevisiae
• Alignment Length: 359
• Identity: 74/359 - (20%)
• Similarity: 129/359 - (35%)
• Gaps: 114/359 - (31%)

  Fly    98 ISDGYCRDIPAYI----ADQILKRSD--QDNDGHLDF---EEFYAMS--LRHKWMVRNMLTRYCR 151
            ||....|...:||    :..|||.:.  :||..:|..   :.|::.:  |:.:|
Yeast    23 ISVSPSRTFVSYIGRSQSTSILKNAPNLEDNVTNLQKIIPKRFFSQTSILKSRW----------- 76

  Fly   152 YVVPPPKPLEGDEPDG---------AYEKQMSICPPPLTMVLFSIIEIIMFLVDVIHFQDDPNYQ 207
                  ||:..:|...         .|::|.|...|..:|.:..     :.|:..|:| ..|...
Yeast    77 ------KPIFNEETTNRYVRLNRFQQYQQQRSGGNPLGSMTILG-----LSLMAGIYF-GSPYLF 129

  Fly   208 DRIGESTSGPAATLF-----------------IYNPYKRYEGWRFV-SYM--------------- 239
            :.:      |..|.|                 ::..::..:.|||: .||
Yeast   130 EHV------PPFTYFKTHPKNLVYALLGINVAVFGLWQLPKCWRFLQKYMLLQKDYVTSKISIIG 188

  Fly   240 --FVHVGIMHLMMNLIIQIFLGIALELVHHWWRVGLVYLAGVLAGSMGTSLTSPRIF-LA----- 296
              |.|....||.||::.....|.:|..:........:|:...:|||: .||..|::. ||
Yeast   189 SAFSHQEFWHLGMNMLALWSFGTSLATMLGASNFFSLYMNSAIAGSL-FSLWYPKLARLAIVGPS 252

  Fly   297 -GASG------GVYALITAHIATIIMNYSEMEYAIVQLLAFLVF----CFTDLGTSVYRHLTDQH 350
             ||||      |.::.:..|...::..:.....|.|..||.:.:    |....|:
Yeast   253 LGASGALFGVLGCFSYLFPHAKILLFVFPVPGGAWVAFLASVAWNAAGCALRWGS---------- 307

  Fly   351 DQIGYVAHLSGAVAGLLVGIGVLRNLEVRRWERI 384
              ..|.|||.|::.|:|.|..:.:.:|.:|..|:
Yeast   308 --FDYAAHLGGSMMGVLYGWYISKAVEKQRQRRL 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rho-4	NP_525084.1	EFh_HEF	<57..197	CDD:355006	23/118 (19%)
		EFh	73..134	CDD:238008	12/44 (27%)
		Rhomboid	226..374	CDD:396315	42/182 (23%)
PCP1	NP_011615.1	Rhomboid	186..329	CDD:396315	37/155 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0705
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810