DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-4 and AT1G74130

DIOPT Version :10

Sequence 1:NP_525084.1 Gene:rho-4 / 32109 FlyBaseID:FBgn0030318 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_177553.3 Gene:AT1G74130 / 843753 AraportID:AT1G74130 Length:322 Species:Arabidopsis thaliana


Alignment Length:150 Identity:34/150 - (22%)
Similarity:63/150 - (42%) Gaps:38/150 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 FVHVGIMHLMMNLIIQIFLGIALELVHHWWRVGLVYLAGVLAGSMGTSLTSPR----IFLAGASG 300
            |.|||..|:::|:                  :||.|....:|.|.|     ||    ::.|||.|
plant   166 FSHVGATHIILNM------------------MGLCYFGARIARSFG-----PRYLLKLYFAGALG 207

  Fly   301 GVYALITAHIATII-------MNYSEMEYAIVQLLA-FLVFCFTDLGTSVYRHLTDQHDQIGYVA 357
            |....:::|..::|       :...:::..|.:|.| ..|:..|.|...:|..:|.....:..|.
plant   208 GSVFFLSSHALSVISLKGQRVVPKDQLKVPIGKLGANGPVYAITLLDMLLYPKVTTYFGLMLRVP 272

  Fly   358 HLSGAVAGLLVGIGVLRNLE 377
            ..:|..:   :|:.:::.||
plant   273 VFAGIYS---LGLNIIKMLE 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-4NP_525084.1 FRQ1 <49..131 CDD:444056
Rhomboid 226..374 CDD:426384 32/145 (22%)
AT1G74130NP_177553.3 GlpG 117..293 CDD:440469 33/149 (22%)
Blue background indicates that the domain is not in the aligned region.

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