DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-4 and RBL5

DIOPT Version :10

Sequence 1:NP_525084.1 Gene:rho-4 / 32109 FlyBaseID:FBgn0030318 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_175667.1 Gene:RBL5 / 841690 AraportID:AT1G52580 Length:309 Species:Arabidopsis thaliana


Alignment Length:251 Identity:58/251 - (23%)
Similarity:102/251 - (40%) Gaps:46/251 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 PPPKPLEGDEPDGAYEKQMSICPPPLTMVLFSIIEIIMFL--VDVIHFQDDPNYQDR------IG 211
            |.|..:|...|..|........|.|....|..:|....|:  ...::..|.|...|.      :|
plant     6 PIPPDIENGPPPPARPHFRPPIPVPWVAWLVPLILAANFVTFATTMYVNDCPARSDECLLFDVLG 70

  Fly   212 ESTSGPAATLFIYNP---------------YKRYEGWRFVSYMFVHVGIMHLMMNLIIQIFLGIA 261
            ..:..|.....:..|               .:..|.||.:|.:::|.|.:|||.|:|..:.:|:.
plant    71 RLSFQPIKENMLLGPSIPTLRKLGALERRLVEEGERWRLISCIWLHGGFLHLMANMISLMCIGMR 135

  Fly   262 LELVHHWWRVGLVYLAGVLAGSMGTSLT---SPRIFLAGASGGVYALITAHIATIIMNYSEMEYA 323
            ||....:.|:|.:|:...|.||:.:.||   ..|:.: ||||.::.|:.|.::.:|.|::..|..
plant   136 LEQEFGFMRIGALYVISGLGGSLVSCLTDSQGERVSV-GASGALFGLLGAMLSELITNWTIYENK 199

  Fly   324 IVQLLAFLVFCFTDLGTSVYRHLTDQHDQIGYV------AHLSGAVAGLLVGIGVL 373
            ...|:..::....:|             .:|::      ||..|.:||..:|..:|
plant   200 CTALMTLILIIVLNL-------------SVGFLPRVDNSAHFGGFLAGFFLGFVLL 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-4NP_525084.1 FRQ1 <49..131 CDD:444056
Rhomboid 226..374 CDD:426384 43/172 (25%)
RBL5NP_175667.1 Rhomboid 100..245 CDD:426384 42/157 (27%)
Blue background indicates that the domain is not in the aligned region.

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