DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-4 and RBL7

DIOPT Version :10

Sequence 1:NP_525084.1 Gene:rho-4 / 32109 FlyBaseID:FBgn0030318 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_194038.1 Gene:RBL7 / 828406 AraportID:AT4G23070 Length:313 Species:Arabidopsis thaliana


Alignment Length:261 Identity:63/261 - (24%)
Similarity:115/261 - (44%) Gaps:56/261 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 IIEIIMFLVDVIHFQDDPNYQDR-------------------IGESTS-----GPAATLFIYNPY 227
            |..:::|:| |:::.|.|:...|                   :|.|:|     |..|...|.  :
plant    39 IANVVVFVV-VMYYNDCPHKSHRCLAKFLGRFSFESFKSNPLLGPSSSTLEKMGALAWGKIV--H 100

  Fly   228 KRYEGWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVGLVYLAGVLAGSMGTSLTSPR 292
            || :.||.::.|::|.|::||:.|:....::|:.||....:.|||.:||.....||:.:.|....
plant   101 KR-QVWRLLTCMWLHAGVIHLLANMCCVAYIGVRLEQQFGFVRVGTIYLVSGFCGSILSCLFLED 164

  Fly   293 IFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVYRHLTDQHDQIGYVA 357
            ....|||..::.|:.|.::.:::|::..:...|.::..||....:||....       ..:...|
plant   165 AISVGASSALFGLLGAMLSELLINWTTYDNKGVAIVMLLVIVGVNLGLGTL-------PPVDNFA 222

  Fly   358 HLSGAVAGLLVGIGVLRNLEVRRWER--------------------ILWWVAVIVYFALMTTGII 402
            |:.|...|.|:|..:|.:.:. .||.                    :|..||.||:.|..|:|::
plant   223 HIGGFFGGFLLGFLLLIHPQF-EWEENQVSLMPGTIVKPKYNTCQLVLCIVASIVFVAGFTSGLV 286

  Fly   403 I 403
            |
plant   287 I 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-4NP_525084.1 FRQ1 <49..131 CDD:444056
Rhomboid 226..374 CDD:426384 38/147 (26%)
RBL7NP_194038.1 Rhomboid 98..224 CDD:426384 34/135 (25%)
Blue background indicates that the domain is not in the aligned region.

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