Protein Alignment rho-4 and rom-3

DIOPT Version :10

• Sequence 1: NP_525084.1
• Gene: rho-4 / 32109
• FlyBaseID: FBgn0030318
• Length: 417
• Species: Drosophila melanogaster
• Sequence 2: NP_503013.2
• Gene: rom-3 / 191000
• WormBaseID: WBGene00004402
• Length: 861
• Species: Caenorhabditis elegans
• Alignment Length: 330
• Identity: 61/330 - (18%)
• Similarity: 123/330 - (37%)
• Gaps: 117/330 - (35%)

  Fly   103 CRD------IPAYIADQILKRSDQDNDGHLDFEEFYAMSLRHKWMVRNMLTRYCRYVVPPPKPLE 161
            ||:      :|.::..||..|               ...::.:.:.|.....||.:|
 Worm   509 CRENHNGPGLPEHLTCQITGR---------------PCCIQFQGLCRIATKEYCDFV-------- 550

  Fly   162 GDEPDGAYEKQMSICPPPLTMVLFSIIEIIMFLVDVIHF--QDDPNYQDRIGESTSGPAATLFIY 224
                .|.:.:..::|         |.:...:.:..:|.|  .|:||.                ||
 Worm   551 ----QGIWHENATLC---------SQVNCFLGICGMIPFFSGDNPNQ----------------IY 586

  Fly   225 NPYKRYEGWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVGLVYLAGVLAGSMGTSLT 289
                     |..:.:|:|.|::||.:::..|::.....|.:....|:.::|.|..::|::.:::.
 Worm   587 ---------RLFTSLFIHAGVIHLALSMAFQMYFMAYQENLIGSKRMAILYFASGISGNLASAIF 642

  Fly   290 SPRIFLAGASG---GVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVYRHLTDQHD 351
            .|.....|.|.   ||::.:                 :|:|..|             |||.|..:
 Worm   643 VPYYPTVGPSSAQCGVFSSV-----------------VVELWHF-------------RHLLDPFE 677

  Fly   352 -QIGYVAHLSGAVAGLLVGIGVLRNLEVRRWERILWWVAVIVYFALMTTGIIIHVFV----PDYF 411
             :...:|||  .|..|::.||::..::  .|..:...:     |.|:|: ||::.::    .||.
 Worm   678 LKFQSIAHL--IVTLLVLCIGLIPWID--NWSHLFGTI-----FGLITS-IIVYPYMDFGDKDYD 732

  Fly   412 PKQEY 416
            |..:|
 Worm   733 PLLQY 737

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rho-4	NP_525084.1	FRQ1	<49..131	CDD:444056	6/33 (18%)
		Rhomboid	226..374	CDD:426384	31/151 (21%)
rom-3	NP_503013.2	Rhomboid	580..724	CDD:426384	42/208 (20%)