DRSC/TRiP Functional Genomics Resources

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Protein Alignment rho-4 and stet

DIOPT Version :10

Sequence 1:NP_525084.1 Gene:rho-4 / 32109 FlyBaseID:FBgn0030318 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_313932.4 Gene:stet / 1274741 VectorBaseID:AGAMI1_010126 Length:458 Species:Anopheles gambiae


Alignment Length:443 Identity:148/443 - (33%)
Similarity:215/443 - (48%) Gaps:116/443 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 RQDTI-DMEEI--------------------PLNQT-----NSQ--EPEDRR-----KMHEIFDK 80
            :|:|: |:|.|                    |:.:|     ||:  |.|.||     |..::||.
Mosquito    19 QQETLADIEHISTIAGSLGSIGTISQSGDGEPVYETDHTDLNSEYDEVELRRELMKDKWRQLFDA 83

  Fly    81 HDSDRDGLINTHE-LKELISDGYCRDIPA----YIADQILKR--------SDQD----------- 121
            .|.:..|.|...: :..|.|..:..::|.    .:.|:.||.        |.||           
Mosquito    84 FDPEGFGEIPVDDFVAALKSPEFLANVPPNKRDILYDRALKAKTSKVEAISFQDFVNVMSGKRSR 148

  Fly   122 ----------------NDGHLDFEEFYAMSLRHKWMVRNMLTRYCRYVVPPPKPLEGDEPDGA-Y 169
                            ||.||.||:        ..:.|.|:......|:|       :|.|.. |
Mosquito   149 SFKCAVHHRDREVCSENDFHLIFED--------PPLFRRMVHVIAMEVLP-------EERDRKYY 198

  Fly   170 EKQMSICPPPLTMVLFSIIEIIMFLVDVIHFQDDPNYQDRIGESTSGPA--------ATLFIYNP 226
            ....|.|||||.::|.:.:|:..|   |.|            ..|.|||        .::|||.|
Mosquito   199 ADNYSCCPPPLFVILVTFVELGFF---VYH------------SLTLGPADPAGPVPIDSMFIYRP 248

  Fly   227 YKRYEGWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVGLVYLAGVLAGSMGTSLTSP 291
            .||.|.|||:.||.:|.|..||..|||||:.:|:.||:||...|:|.||||||||||:|||:..|
Mosquito   249 DKRQEVWRFLFYMVLHAGWFHLGFNLIIQLLVGLPLEMVHGSTRIGCVYLAGVLAGSLGTSVFDP 313

  Fly   292 RIFLAGASGGVYALITAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVYRHLTDQ----HDQ 352
            .::|.|||||||||:.||:|.:::||..|:|.|::|||..:|...|:|.::|...:.:    ...
Mosquito   314 EVYLVGASGGVYALLAAHLANVMLNYRNMQYGILRLLAIFLFASCDVGFAIYSRYSVEPASGAPS 378

  Fly   353 IGYVAHLSGAVAGLLVGIGVLRNLEVRRWERILWWVAVIVYFALMTTGIIIHV 405
            :.|||||:||:|||.:|:.||:|.|.:..|::|||||:.||.|.....|:.::
Mosquito   379 VSYVAHLTGALAGLTIGLLVLKNFEQKLHEQLLWWVALGVYAACTIFAIVFNL 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rho-4NP_525084.1 FRQ1 <49..131 CDD:444056 34/154 (22%)
Rhomboid 226..374 CDD:426384 76/151 (50%)
stetXP_313932.4 Rhomboid 248..400 CDD:426384 76/151 (50%)

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