DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1561 and nhr-246

DIOPT Version :9

Sequence 1:NP_996412.1 Gene:CG1561 / 32108 FlyBaseID:FBgn0030317 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001256661.1 Gene:nhr-246 / 191499 WormBaseID:WBGene00014192 Length:386 Species:Caenorhabditis elegans


Alignment Length:374 Identity:88/374 - (23%)
Similarity:146/374 - (39%) Gaps:113/374 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 EDLPNEQVTQFLRQLVS---QLWPELGA-----NPEL----RLERASAKGDNYLGVVWRLQAASD 273
            |::|  ...::|.:|:.   .:.|::|.     |.||    .|.:.....||           .|
 Worm     7 ENIP--LTKEWLAELIEIKIGVKPKIGTVGILENSELGFMSLLRKVRLHFDN-----------DD 58

  Fly   274 SKRSLVVKLPPQNRVRRKQFFARPCFLRETAAYEVFLPLTALIQDKWKIIGDDRFRQHALC---- 334
            ..:.:|:|: |||        .:.|.:.|.|...|.....:::         :||..:..|    
 Worm    59 LPKHVVLKI-PQN--------TKGCSVVENAGGGVKNVDHSVV---------ERFMHNTECNYYK 105

  Fly   335 -FGTRQDEPNE-----------------CIVLEDL-SCAGFSLHNRFLDLSVEHVRRVMLTYAKL 380
             |.:..::|.:                 .||||.| .|   .||:.....:.:.:.:::....||
 Worm   106 LFSSLSEKPLQIPTTYLASKAGEKAPVPVIVLEMLEDC---KLHDLIPGFNEDQLFKIVDELVKL 167

  Fly   381 HAISLA---GKRQLPEKMQQ-----LQQLV-DIFEQRRDDHALGV---YFENLKESALSALLAPA 433
            |..||.   .|..:|::.:.     ||.:| |:..:...:..|||   |.||..::         
 Worm   168 HIFSLTTEKWKEIVPDESKLAMSGFLQCMVADVGRKLAQNPELGVILSYVENTLDT--------- 223

  Fly   434 DDAYRVRLEAYFARGSYFELLLPLVSGFNCEPFAVICHGDCWNNNILYKSTERGELED--VRLID 496
            |..|..::     |..|          .|.|..:||||||.|...||:      :.||  ..::|
 Worm   224 DPNYLQKM-----RDEY----------INEERPSVICHGDLWAPQILW------DKEDNIAGIVD 267

  Fly   497 WQLMRYASPVTDLAYFLFTCTSRRFRQRHLENMLEDYYEELGLQLIRLG 545
            ||.....||:.||.:.|.||||.:.|:...:.:|:.||.:|.:.|...|
 Worm   268 WQATHRGSPMEDLHHILSTCTSVQNRKTFTKPLLDHYYNKLKVGLKEKG 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1561NP_996412.1 EcKinase 257..546 CDD:281023 78/326 (24%)
nhr-246NP_001256661.1 CHK 134..314 CDD:214734 60/212 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I6679
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433354at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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