DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pkm and T16G1.6

DIOPT Version :10

Sequence 1:NP_996412.1 Gene:pkm / 32108 FlyBaseID:FBgn0030317 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_506234.2 Gene:T16G1.6 / 188554 WormBaseID:WBGene00011800 Length:431 Species:Caenorhabditis elegans


Alignment Length:250 Identity:62/250 - (24%)
Similarity:100/250 - (40%) Gaps:67/250 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 LIQDKWKIIGDDRFRQHALCFGTRQDEPNECIVLEDLSCAGFSLHNR---FL------DLSVEHV 370
            ::.:||                   ::|.|.:..:......|...|:   ||      |:::.|:
 Worm   127 VLAEKW-------------------NKPEELLNAKIFFSKKFDSENKLKGFLGMEYVDDVTIRHL 172

  Fly   371 RRVMLTYAKLHAISLAGKRQLPEKM----QQLQQLVDI-FEQR-----RDDHALGVYF------- 418
            ...:..| :||.:..|..:...|.:    ::||.:... |:|.     .||...|.|.       
 Worm   173 YCNLKPY-ELHPVLKAVAQLQAESLHLSDEELQSISGFDFKQMMGTMFNDDGLKGNYKQTRDINP 236

  Fly   419 ENLKESALSALLAPADDAYRVRLEAYFARGSYFELL--LPLVSGFNCEPFAVICHGDCWNNNILY 481
            |.|||..         |.    :||:......||..  |..|.|.:.:   |:.|||.|..|||:
 Worm   237 ERLKEKT---------DI----VEAFGMEVVNFEFAGNLNKVVGIHKD---VLVHGDLWAANILW 285

  Fly   482 KSTERGELEDVRLIDWQLMRYASPVTDLAYFLFTCT-SRRFRQRHLENMLEDYYE 535
            ...: |:....::||:|::...:|..||.. :|.|| |...||.|.|.:||.:||
 Worm   286 NEND-GKFSASKVIDYQIIHMGNPAEDLVR-VFLCTLSGADRQAHWEKLLEQFYE 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pkmNP_996412.1 PTZ00121 <7..222 CDD:173412
EcKL 257..546 CDD:397213 61/249 (24%)
T16G1.6NP_506234.2 DUF1679 8..417 CDD:369592 61/249 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.