DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nod and CIN8

DIOPT Version :9

Sequence 1:NP_001285129.1 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_010853.2 Gene:CIN8 / 856648 SGDID:S000000787 Length:1000 Species:Saccharomyces cerevisiae


Alignment Length:871 Identity:187/871 - (21%)
Similarity:313/871 - (35%) Gaps:291/871 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VRIAVREAPYRQFLGRREPS-------VVQFPPWSDGKSLIV------------DQNEFHFDHAF 54
            :.:|||      ..||.|..       ||..|..:..|.:.:            :...:..|..|
Yeast    37 ITVAVR------CRGRNEREISMKSSVVVNVPDITGSKEISINTTGDTGITAQMNAKRYTVDKVF 95

  Fly    55 PATISQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPP---GEILPEHLGILPRA 116
            ....|||.::..:..||....::|:.||.|.||.|.|||:|:|.....   || |.:..||:||.
Yeast    96 GPGASQDLIFDEVAGPLFQDFIKGYNCTVLVYGMTSTGKTYTMTGDEKLYNGE-LSDAAGIIPRV 159

  Fly   117 LGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGS-------------------------- 155
            |..:|:.:..:|.:    ..|..||||:|||:..|||.|                          
Yeast   160 LLKLFDTLELQQND----YVVKCSFIELYNEELKDLLDSNSNGSSNTGFDGQFMKKLRIFDSSTA 220

  Fly   156 --------------------------TPHMPMVAARC---------------------------- 166
                                      ||...::..|.                            
Yeast   221 NNTTSNSASSSRSNSRNSSPRSLNDLTPKAALLRKRLRTKSLPNTIKQQYQQQQAVNSRNNSSSN 285

  Fly   167 -----------------QRCTCLP--------LHSQADLH--------HILELGTRNRRVRPTNM 198
                             ||.:..|        :.:..:.|        ::|:.|.::|:|..|.|
Yeast   286 SGSTTNNASSNTNTNNGQRSSMAPNDQTNGIYIQNLQEFHITNAMEGLNLLQKGLKHRQVASTKM 350

  Fly   199 NSNSSRSHAIVTIHVKSKTHH------SRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSIN 257
            |..|||||.|.||.:..| |.      |:||:|||||||.:.|:|......:|..:||..||::.
Yeast   351 NDFSSRSHTIFTITLYKK-HQDELFRISKMNLVDLAGSENINRSGALNQRAKEAGSINQSLLTLG 414

  Fly   258 KVVMSMA--AGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKKL 320
            :|:.::.  :||  ||:|:|.||.:||.||...:....:|.|||.:....||.|||.:.:.||.:
Yeast   415 RVINALVDKSGH--IPFRESKLTRLLQDSLGGNTKTALIATISPAKVTSEETCSTLEYASKAKNI 477

  Fly   321 RLNP----------------MQVARQKQSLAARTTHVFRQALCTSTAIKSNAANHNSIVVPKSKY 369
            :..|                |::|:.|..|             .||..|      ..|.:.:..|
Yeast   478 KNKPQLGSFIMKDILVKNITMELAKIKSDL-------------LSTKSK------EGIYMSQDHY 523

  Fly   370 STTKPLSAVLHRTRSEL--------GMTPKAKKRARELLELEETTLELSSIHIQDSSLSLLGFHS 426
               |.|::.|...::|:        .:|.|.....::.|:.:||   :.|.:.|..||.....|.
Yeast   524 ---KNLNSDLESYKNEVQECKREIESLTSKNALLVKDKLKSKET---IQSQNCQIESLKTTIDHL 582

  Fly   427 DSDKDRHLMPPPTGQEPRQASSQNSTLMGIVE------------ETEPKESSKVQQSMVAPTVPT 479
            .:..|:.      .:...:.|..|:.|..:.|            |.:..:..::..:.....:.:
Yeast   583 RAQLDKQ------HKTEIEISDFNNKLQKLTEVMQMALHDYKKRELDLNQKFEMHITKEIKKLKS 641

  Fly   480 TVRCQLFNTTISPISLRASSSQRELSGIQPMEETVVASPQQ-------PCLRRSVRLASSMRSQN 537
            |:..|| ||......|:.::.|..|..|:....|::.:.|:       .|:::.:..:       
Yeast   642 TLFLQL-NTMQQESILQETNIQPNLDMIKNEVLTLMRTMQEKAELMYKDCVKKILNES------- 698

  Fly   538 YGAIPKVMNL-----------------RRSTRLAGIREHATSV-------VVKNETDAI--PHLR 576
                ||..|:                 ..:..|:.|.|...::       ..||....:  .|:.
Yeast   699 ----PKFFNVVIEKIDIIRVDFQKFYKNIAENLSDISEENNNMKQYLKNHFFKNNHQELLNRHVD 759

  Fly   577 STVQKKRTRNVKPAPKAWMANNTKCFLDLLNNGNVKQLQEIPGIGPKSAFSLALHRSRLGCFENL 641
            ||.:     |::.....::.|..|...|.|:......:|.:     .:|.|..:.:..     :|
Yeast   760 STYE-----NIEKRTNEFVENFKKVLNDHLDENKKLIMQNL-----TTATSAVIDQEM-----DL 809

  Fly   642 FQVKSLPIWSGNKWER-FCQINCLDT 666
            |:.|.:      |||. |..||..|:
Yeast   810 FEPKRV------KWENSFDLINDCDS 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_001285129.1 KISc 8..325 CDD:214526 117/474 (25%)
KISc 8..318 CDD:276812 114/451 (25%)
ComEA 540..648 CDD:224472 22/133 (17%)
CIN8NP_010853.2 KISc_BimC_Eg5 34..486 CDD:276815 117/462 (25%)
Smc <493..>772 CDD:224117 53/326 (16%)
CCDC158 677..>928 CDD:318193 31/185 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345890
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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