DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and AT1G18550

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_173290.4 Gene:AT1G18550 / 838436 AraportID:AT1G18550 Length:725 Species:Arabidopsis thaliana


Alignment Length:638 Identity:173/638 - (27%)
Similarity:271/638 - (42%) Gaps:125/638 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AKLSAVRIAVREAPYR------------QFLGRREPSVVQFPPWSDG---KSLIVDQNEFHFDHA 53
            |.:|.:.:.||..|..            :.|.:|:..:.:|...:|.   |.|.|  ..|.||.:
plant   147 ASVSRILVFVRLRPMGKKERENGSRCCVKVLNKRDVYLTEFTNENDYLRLKRLRV--RHFTFDSS 209

  Fly    54 FPATISQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALG 118
            ||.|.:|.|:|......||:.:|||...:...||.||.||:|:|..|      .|:.|::..|:.
plant   210 FPETTTQQEVYSTTTGDLVEAVLEGRNGSVFCYGATGAGKTYTMLGT------MENPGVMVLAIK 268

  Fly   119 DIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPHMPMVAARCQR------CTCLPLHSQ 177
            |:|.:|..|..:....  |:.|::|:|||...|||  :|..|::....::      .|....:|.
plant   269 DLFAKVRQRSLDGNHV--VHLSYLEVYNETVRDLL--SPGRPLILREDKQGIVAAGLTQYRAYST 329

  Fly   178 ADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSKTHHSRMNI---------VDLAGSEGV 233
            .::..:|:.|.:||...||..|..|||||||:.:.|:.||..:.|||         :||||||..
plant   330 DEVMALLQRGNQNRTTEPTRCNETSSRSHAILQVIVEYKTRDASMNIISRVGKLSLIDLAGSERA 394

  Fly   234 RRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACIS 298
            ..|....:...||.|||..||:::..:.::..|...||||:|.||.:|:.||........:|.||
plant   395 LATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGSCNTVMIANIS 459

  Fly   299 PHQCDLSETLSTLRFGTSAKKLRLNPMQVAR--------------------QKQSLAARTTHV-F 342
            |......||.:||.:...||::|:...:|..                    ||::...|.... .
plant   460 PSSQSFGETQNTLHWADRAKEIRVKECEVNEEVVQVGEEEGADQAKLLLELQKENSELRVQLAKQ 524

  Fly   343 RQALCTSTAIKSNAANHNSIV--VPKSKYSTTKPLSAVL--------HRTRSELGMTPKAKKRAR 397
            :|.|.|..|....|||:|:.:  .|.|..|...|.||:.        |...|....||::.||.:
plant   525 QQKLLTLQAENIAAANNNNNISLTPPSISSLMTPPSALTAQQKKKPRHSLLSGTCFTPESLKRTK 589

  Fly   398 ELLELEETTLELSSIHIQDSSLSLLGFHSDSDKDRHLMPPPTGQEPRQASSQNSTLMGIVEETEP 462
                .||...||      ..::..|....:..|..|.:         |...|...||   ::...
plant   590 ----AEEAVKEL------QLTVKALKMEMERMKREHGL---------QMKKQKDELM---KDLCS 632

  Fly   463 KESSKVQQSMVAPTVPTTVRCQLFNTTISPISLRASSSQRELSGIQPMEETVVASPQQPCLRRS- 526
            ::|.|           |..||:.....::..|||....::||.  .|...  .|||.....:|| 
plant   633 RKSEK-----------TPERCKETRRIVTRGSLRPKEKEKELK--SPSHR--FASPVAAAKKRSF 682

  Fly   527 --VRLASSMRSQNYGAIPKVMNLRRSTRLAG-IREHATSVVVKNETDAIPHLR 576
              :.:|::..:.:          ||.||..| :.:.|.|.::: ...|.||::
plant   683 WDITVANTSPALD----------RRKTRSHGLVHQEAPSKLLQ-PGFARPHMK 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 106/339 (31%)
ComEA 606..>645 CDD:441164
AT1G18550NP_173290.4 Kinesin 157..481 CDD:459720 107/335 (32%)
Blue background indicates that the domain is not in the aligned region.

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