DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and AT5G60930

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001332385.1 Gene:AT5G60930 / 836214 AraportID:AT5G60930 Length:1335 Species:Arabidopsis thaliana


Alignment Length:727 Identity:175/727 - (24%)
Similarity:304/727 - (41%) Gaps:169/727 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 VDQNEFHFDH-----AFPATISQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPP 102
            :..:.|.:|.     .:|.:    |:|...:.||||.|.:|:..|.|||||||:||:|:||....
plant    40 IGSHTFTYDFVYGNGGYPCS----EIYNHCVAPLVDALFKGYNATVLAYGQTGSGKTYTMGTNYS 100

  Fly   103 GEILPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGS------------ 155
            |:.  .:.|::|..:.|||.||...:::::..|:|  |||||:.|:.||||.|            
plant   101 GDC--TNGGVIPNVMEDIFRRVETTKDSSELLIRV--SFIEIFKEEVFDLLDSNSSALLKNDSGV 161

  Fly   156 -TPHMPMVAARCQ------------RCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHA 207
             ..|..:..|..|            ..|...:.::.::...|..|:.:|....|||||.||||||
plant   162 QAKHTALSRAPIQIRETASGGITLAGVTEAEVKTKEEMGSFLARGSLSRATGSTNMNSQSSRSHA 226

  Fly   208 IVTIHVKSK---------THH-------SRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSI 256
            |.||.::.|         |..       :::::|||||||..:|||.:|:..:||::||.|||::
plant   227 IFTITLEQKKIAGGSCTTTEDGGEDILCAKLHLVDLAGSERAKRTGADGMRLKEGIHINKGLLAL 291

  Fly   257 NKVVMSMA-------AGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFG 314
            ..|:.::.       .||  :|||||.||.:||.||...|....:||:||...:..|||:||::.
plant   292 GNVISALGDEKKRKEGGH--VPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYA 354

  Fly   315 TSAKKLR----LNPMQVARQKQSLAARTTHVFRQALCTSTAIKSNAANHNSIVVPKSKYSTTKPL 375
            ..|:.::    :|......|.|.:.::...:..:.|    ..:.::...:.:.:.|.|.|..:..
plant   355 NRARNIQNKAVINRDPATAQMQRMRSQIEQLQTELL----FYRGDSGAFDELQILKHKISLLEAS 415

  Fly   376 SAVLH------RTRSE---------------LGMTPKAKKRARELLELEE--------------- 404
            :..||      |..||               |.|..::.:..:.|.|:|.               
plant   416 NRELHNELQERRVASEHFSKRAYDAQVEKDKLIMIIESVRNGKSLDEIESCQNEDVGLVNKYVSK 480

  Fly   405 -TTLELSSIHIQDSSLSLLGFHSDSDKDRHLMPP------PTGQEPRQASSQNSTLMGIVEETEP 462
             ..||...:||:  :|.....|..||....:.|.      |:..|   :|.....:|.:.:|.|.
plant   481 IQELEGELLHIK--NLKKTSNHQYSDDSYDVGPRSNNVLFPSSNE---SSDCEDKVMDVTDELEF 540

  Fly   463 KE-----------------------SSKVQQSMVAPTVPTTVRCQLFNTTISPISLRASSSQREL 504
            :|                       ..|..:.....:..|:|..|.:...:..:.....:.|||:
plant   541 QEKEIEHCSLQEKLDMELKELDKRLEEKEAEMKRFSSGGTSVLKQHYEKKVYDLEQEKRALQREI 605

  Fly   505 SGIQPMEETVVASP---QQPCLRRSVRLASSMRSQNYGAIPKVMNLRRSTRLAGIREHATSVVVK 566
            .|::....::.:.|   .|......|:..:::.:|     ..|:..::..:...:|:...|    
plant   606 EGLRHNLASIPSGPGDGAQKLKEEYVQKLNTLETQ-----VSVLKKKQDAQAQLMRQKQKS---- 661

  Fly   567 NETDAIPHLRSTVQKKRTRNVKPAPK---------AWMANNTKCFLDLLNNG--NVKQLQEIPGI 620
              .||...|:..:.:.:::.|:...|         ||.|:..|..:.|...|  |..::.::..:
plant   662 --DDAAIKLQDEIHRIKSQKVQLQQKIKQESEQFRAWKASREKEVMQLKKEGRRNEYEMHKLMAL 724

  Fly   621 GPKSAFSLALHR 632
            ..|.  .|.|.|
plant   725 NQKQ--KLVLQR 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 110/327 (34%)
ComEA 606..>645 CDD:441164 6/29 (21%)
AT5G60930NP_001332385.1 KISc_KIF4 6..361 CDD:276823 111/330 (34%)
SMC_prok_B 529..>845 CDD:274008 35/219 (16%)

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