DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nod and FRA1

DIOPT Version :9

Sequence 1:NP_001285129.1 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_199593.2 Gene:FRA1 / 834833 AraportID:AT5G47820 Length:1035 Species:Arabidopsis thaliana


Alignment Length:670 Identity:170/670 - (25%)
Similarity:294/670 - (43%) Gaps:132/670 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GKSLI-VDQNEFHFDHAF-----PATISQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYS 96
            ||..: :..:.|.|||.:     |:|    |||:....||||.|.:|:..|.|||||||:||:|:
plant    39 GKPQVQIGSHSFTFDHVYGSSGSPST----EMYEECAAPLVDGLFQGYNATVLAYGQTGSGKTYT 99

  Fly    97 MGMTPPGEILPEHLGILPRALGDIFERV-TARQENNKDAIQVYASFIEIYNEKPFDLL------- 153
            || |..|:  ....||:|:.:..:|.:: |.:|:..   .|::.|||||:.|:..|||       
plant   100 MG-TGCGD--SSQTGIIPQVMNALFTKIETLKQQIE---FQIHVSFIEIHKEEVQDLLDPCTVNK 158

  Fly   154 ---GSTPHMPMVA-----------------ARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNM 198
               .:|.|:..||                 ......|.:.:.:..::...|:.|:.:|....|||
plant   159 SDTNNTGHVGKVAHVPGKPPIQIRETSNGVITLAGSTEVSVSTLKEMAACLDQGSVSRATGSTNM 223

  Fly   199 NSNSSRSHAIVTIHV--------------------KSKTHHSRMNIVDLAGSEGVRRTGHEGVAR 243
            |:.|||||||.||.|                    |.:...:::::|||||||..:|||.:|:..
plant   224 NNQSSRSHAIFTITVEQMRKINTDSPENGAYNGSLKEEYLCAKLHLVDLAGSERAKRTGSDGLRF 288

  Fly   244 QEGVNINLGLLSINKVVMSMA-------AGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQ 301
            :|||:||.|||::..|:.::.       ..|  :|||||.||.:||.||...|....:|||||..
plant   289 KEGVHINKGLLALGNVISALGDEKKRKDGAH--VPYRDSKLTRLLQDSLGGNSRTVMIACISPAD 351

  Fly   302 CDLSETLSTLRFGTSAKKLRLNPMQVAR---QKQSLAARTTHVFRQALCTSTAIKSNAANHNSIV 363
            .:..|||:||::...|:.:|..|: |.|   ..:.|..|....:.||   ..::::..::...:.
plant   352 INAEETLNTLKYANRARNIRNKPV-VNRDPVSSEMLKMRQQVEYLQA---ELSLRTGGSSCAEVQ 412

  Fly   364 VPKSKY----STTKPLSAVLHRTRSELGMTPKAKKRARELLELEETTLELSSIHIQDSSLSLLGF 424
            ..|.:.    :..:.|...||..||.   .|..:...::..::....: :.|:.......||   
plant   413 ALKERIVWLETANEELCRELHEYRSR---CPGVEHSEKDFKDIRADDI-VGSVRPDGLKRSL--- 470

  Fly   425 HSDSDKDRHLMPPPTG------QEPRQ------ASSQNSTLMGIVEETEPKESSKVQQSMVAPTV 477
            ||....:..::...||      :|.::      .:|.:..|..:....|.|||   :..:.....
plant   471 HSIESSNYPMVEATTGDSREIDEEAKEWEHKLLQNSMDKELYELNRRLEEKES---EMKLFDGYD 532

  Fly   478 PTTVRCQLFNTTISPISLRASSSQRELSGIQPMEETVVASPQQPCLRRSVRLASSMRSQNYGAI- 541
            |..:: |.|...|:.:.....|.|.|.:.:....|.:.:..|...|:       .:.:||..|: 
plant   533 PAALK-QHFGKKIAEVEDEKRSVQEERNRLLAEIENLASDGQAQKLQ-------DVHAQNLKALE 589

  Fly   542 PKVMNLRRSTRLAGIREHATSVVVKNE--TDAIPHLRSTVQKKRTRNVK---------PAPKAWM 595
            .::::|::.      :|....::.:.:  .||...|:..:|..:.:.|:         ...:.|.
plant   590 AQILDLKKK------QESQVQLLKQKQKSDDAARRLQDEIQSIKAQKVQLQHRMKQEAEQFRQWK 648

  Fly   596 ANNTKCFLDLLNNGNVKQLQ 615
            |:..|..|.|...|...:.:
plant   649 ASREKELLQLRKEGRKSEYE 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_001285129.1 KISc 8..325 CDD:214526 116/347 (33%)
KISc 8..318 CDD:276812 114/340 (34%)
ComEA 540..648 CDD:224472 14/88 (16%)
FRA1NP_199593.2 KISc_KIF4 10..371 CDD:276823 115/343 (34%)
SbcC <490..>912 CDD:223496 33/196 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0244
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.