DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and PAKRP1

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_567423.1 Gene:PAKRP1 / 827054 AraportID:AT4G14150 Length:1292 Species:Arabidopsis thaliana


Alignment Length:780 Identity:204/780 - (26%)
Similarity:304/780 - (38%) Gaps:203/780 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SAVRIAVREAPYRQFLGRREPSVVQFPPWSDGKSLIVDQNEFHFDHAFPATISQDEMYQALILPL 71
            |.|::.||..|..:  |.....:|:   .....||.|....|.||.......:|::|:|.:..||
plant    90 SGVKVIVRMKPLNK--GEEGDMIVE---KMSKDSLTVSGQTFTFDSIANPESTQEQMFQLVGAPL 149

  Fly    72 VDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHL-----GILPRALGDIFERVTAR--QE 129
            |:..|.||..:..||||||:||:|:| ..|...:|.|||     |:.||    :|||:.||  :|
plant   150 VENCLSGFNSSVFAYGQTGSGKTYTM-WGPANGLLEEHLCGDQRGLTPR----VFERLFARIKEE 209

  Fly   130 NNKDA-----IQVYASFIEIYNEKPFDLLGSTPHMPMV------AARCQRCTCLPLHSQADLHHI 183
            ..|.|     .|...|.:|||||:..|||..:....|:      ....:..|...:.:..|:..:
plant   210 QVKHAERQLNYQCRCSLLEIYNEQITDLLDPSQKNLMIREDVKSGVYVENLTEEYVKNLTDVSQL 274

  Fly   184 LELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSKTHH----------SRMNIVDLAGSEGVRRTGH 238
            |..|..|||...|::|:.|||||.:.|..|:|:..:          ||:|:|||||||..:.||.
plant   275 LIKGLGNRRTGATSVNTESSRSHCVFTCVVESRCKNVADGLSSFKTSRINLVDLAGSERQKSTGA 339

  Fly   239 EGVARQEGVNINLGLLSINKVV-----MSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACIS 298
            .|...:|..|||..|..:..::     :|.......||||||.||.:||.||...:.|..:..:|
plant   340 AGERLKEAGNINRSLSQLGNLINILAEISQTGKPRHIPYRDSRLTFLLQESLGGNAKLAMVCAVS 404

  Fly   299 PHQCDLSETLSTLRFGTSAKKLR-------------------------------------LNPMQ 326
            |.|...|||.|||||...||.::                                     .|| .
plant   405 PSQSCRSETFSTLRFAQRAKAIQNKAVVNEVMQDDVNFLRGVIHQLRDELQRMKNDGNNPTNP-N 468

  Fly   327 VARQKQSLAARTTHVFR----------------------------QALCTSTAIKSNAA----NH 359
            ||......|.|:.::.|                            :.||....::|:.|    ||
plant   469 VAYSTAWNARRSLNLLRSFGLGHPRSLPHEDNDGDIEMEIDEAAVERLCVQVGLQSSLASEGINH 533

  Fly   360 NSIVVPKSKYSTT--------------------------KPLSAVLHRTRSELGMTPKAKKRARE 398
            :...| ||.:|:.                          :|.:....||.:|.|:.....|...:
plant   534 DMNRV-KSIHSSDGQSIEKRLPEDSDVAMEDACCHTENHEPETVDNMRTETETGIRENQIKTHSQ 597

  Fly   399 LLELEETTLELSSIHIQDSSLSLLGFHSDSDKDRHLMPPPTGQEPRQASSQNSTLMGIVEETEPK 463
            .|:.|.:...||   ::|:..|.|....|......|:       |:..:|.|..:...|::.|..
plant   598 TLDHESSFQPLS---VKDALCSSLNKSEDVSSCPDLV-------PQDVTSANVLIADGVDDPEHL 652

  Fly   464 ESSKVQQSMVAPTVPTTVRCQLFNTT--ISPI------SLRAS----SSQRELSGIQPMEETVVA 516
            .:|......:.|...|.|   |.:.|  :||.      ||:.|    :||::..|...:.|  .|
plant   653 VNSASPSLCIDPVGATPV---LKSPTLSVSPTIRNSRKSLKTSELSTASQKDSEGENLVTE--AA 712

  Fly   517 SPQQPCLRRSVRLASSMRSQNYGAIPKVMNLRRSTRLA-----GIR---EHATSVVVKNET---- 569
            .|.....::....:|::.:|.....|.     |:.|||     ||:   .:..|...:..|    
plant   713 DPSPATSKKMNNCSSALSTQKSKVFPV-----RTERLASSLHKGIKLLESYCQSTAQRRSTYRFS 772

  Fly   570 ----DAIPHLRSTVQKKRTRNVK--PAPKAWMANNTKCFL----------DLLNNGNVKQLQEIP 618
                |:.|   ||...|....|:  |...|....|||.||          |....|::..||.:|
plant   773 FKAPDSEP---STSISKADAGVQTIPGADAISEENTKEFLCCKCKCREQFDAQQMGDMPNLQLVP 834

  Fly   619  618
            plant   835  834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 118/342 (35%)
ComEA 606..>645 CDD:441164 4/13 (31%)
PAKRP1NP_567423.1 PLN03188 2..1292 CDD:215621 204/780 (26%)

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