DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and AT3G45850

DIOPT Version :9

Sequence 1:NP_001285129.1 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001190017.2 Gene:AT3G45850 / 823728 AraportID:AT3G45850 Length:1065 Species:Arabidopsis thaliana


Alignment Length:782 Identity:192/782 - (24%)
Similarity:297/782 - (37%) Gaps:235/782 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RREPSVVQFPPWSDGKSLIVDQNEFHFDHAFPATISQDEMYQALILPLVDKLLEGFQCTALAYGQ 88
            |||.:..|.   ..||.:   ...|.||..|.....|.::|...|.|:|.::|||:.||..||||
plant    84 RREVAATQS---IAGKHI---DRHFAFDKVFGPASQQKDLYDQAICPIVFEVLEGYNCTIFAYGQ 142

  Fly    89 TGTGKSYSM--GMTPPGEILPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFD 151
            |||||:|:|  |........|...|::|||:..||:.:.|:...    ..:..:|:|:|||:..|
plant   143 TGTGKTYTMEGGARKKNGEFPSDAGVIPRAVKQIFDILEAQGAE----YSMKVTFLELYNEEISD 203

  Fly   152 LLGSTPHMPMVAARCQRCTCLP----------------LHSQADLHHILELGTRNRRVRPTNMNS 200
            ||.....:..|..:.::...|.                :.:..:::.|||.|:..||...|.:|.
plant   204 LLAPEETIKFVDEKSKKSIALMEDGKGSVFVRGLEEEIVSTANEIYKILEKGSAKRRTAETLLNK 268

  Fly   201 NSSRSHAI--VTIHVKSKTHH-------SRMNIVDLAGSEGVRRTG-HEGVARQEGVNINLGLLS 255
            .|||||:|  :|||:|..|..       .::|:|||||||.:.|:| .||.||:.| .||..||:
plant   269 QSSRSHSIFSITIHIKENTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAG-EINKSLLT 332

  Fly   256 INKVVMSMA--AGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAK 318
            :.:|:.::.  :||  ||||||.||.:|:.||..::....:|.|||....|.||||||.:...||
plant   333 LGRVINALVEHSGH--IPYRDSKLTRLLRESLGGKTKTCVIATISPSIHCLEETLSTLDYAHRAK 395

  Fly   319 KLRLNP----------------MQVARQKQSLAARTTHVFRQALCTSTAIKSNAANHNSIVVPKS 367
            .::..|                .::.|.||.:.|                   |...|.|.:||.
plant   396 NIKNKPEINQKMMKSAVMKDLYSEIDRLKQEVYA-------------------AREKNGIYIPKD 441

  Fly   368 KY---------------------------------------STTKPLSAVLHRTRSELGMTPKAK 393
            :|                                       ..|..||..|.:|..:|      :
plant   442 RYIQEEAEKKAMAEKIERLELQSESKDKRVVDLQELYNSQQILTAELSEKLEKTEKKL------E 500

  Fly   394 KRARELLELEE------TTLE-----LSSIHIQDSSLSLLGFH---------SD----------- 427
            :....|.:|||      .|::     :|::...:.||....|.         ||           
plant   501 ETEHSLFDLEEKYRQANATIKEKEFVISNLLKSEKSLVERAFQLRTELESASSDVSNLFSKIERK 565

  Fly   428 ---SDKDRHLMPPPTGQEPRQASSQNSTLMGIV--EETEPKESSKVQQSMVAPTVPTT--VRCQL 485
               .|.:|.|:.....|..:|....:.|:...|  :|.:.|...:..:|.|:.....|  :|.:|
plant   566 DKIEDGNRFLIQKFQSQLTQQLELLHKTVASSVTQQEVQLKHMEEDMESFVSTKSEATEELRDRL 630

  Fly   486 ------------------------FNTTISPISLRASSSQREL-------------------SGI 507
                                    ..:|.|.::...|....||                   |.:
plant   631 SKLKRVYGSGIEALDNIAVKLDGNSQSTFSSLNSEVSKHSHELENVFKGFASEADMLLQDLQSSL 695

  Fly   508 QPMEETVVASPQQPCLRRSVRLASSMRSQNYGAIPKVMNL-RRSTRLAGIREHATSVVVKNETDA 571
            ...||.::...||.....| |...:.||.:...:.....| ..:|:|.||.|.|           
plant   696 NKQEEKLITFAQQQRKAHS-RAVDTARSVSKVTVEFFKTLDTHATKLTGIVEEA----------- 748

  Fly   572 IPHLRSTVQKKRTRNVKPAPKAWMANNTKCFL----DLLNNGNVKQLQEIPGIGPKSAFSLALHR 632
                 .||..|:....:...:...||..:..|    :||.|.|.::         |:...:|:|.
plant   749 -----QTVNHKKLSEFENKFEECAANEERQLLEKVAELLANSNARK---------KNLVQMAVHD 799

  Fly   633 SR 634
            .|
plant   800 LR 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_001285129.1 KISc 8..325 CDD:214526 116/346 (34%)
KISc 8..318 CDD:276812 113/323 (35%)
ComEA 540..648 CDD:224472 21/100 (21%)
AT3G45850NP_001190017.2 KISc_BimC_Eg5 53..406 CDD:276815 116/334 (35%)
SMC_prok_B 391..>635 CDD:274008 44/268 (16%)
SCP-1 <454..>890 CDD:114219 66/380 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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