DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and kif1ca

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_068077671.2 Gene:kif1ca / 570771 ZFINID:ZDB-GENE-200303-1 Length:1185 Species:Danio rerio


Alignment Length:476 Identity:136/476 - (28%)
Similarity:217/476 - (45%) Gaps:92/476 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SAVRIAVREAPYR-QFLGRREPSVVQFPPWSDGKSLIVDQNE-------FHFDHAF--------P 55
            |:|::|||..|:. :...|....|:|.   .|..:.|.:..:       |.||:::        |
Zfish     4 SSVKVAVRVRPFNSRETNRGAKCVIQM---QDKSTCITNPKQPKESPKNFTFDYSYWSHSSEEDP 65

  Fly    56 ATISQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYS-MGMTPPGEILPEHLGILPRALGD 119
            :..||.::||.:...::....||:.....||||||.||||: ||...||:     .||:|:...|
Zfish    66 SFASQRKVYQDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGKQDPGQ-----QGIIPQMCED 125

  Fly   120 IFERVTARQENNKDAIQVYASFIEIYNEKPFDLLG-------STPHMPMVAARCQRCTCLPLHSQ 177
            :| |.||...:...:..|..|::|||.|:..|||.       .....|::....:..:.:.:.:.
Zfish   126 LF-RQTAENTDPDLSFSVEVSYMEIYCERVRDLLNPKSKGALRVREHPIMGPYVEDLSKMAVTNY 189

  Fly   178 ADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSKTHH----------SRMNIVDLAGSEG 232
            :|:..:::.|.:.|.|..||||..||||||:.||......|.          |::::|||||||.
Zfish   190 SDIADLMDTGNKARTVAATNMNETSSRSHAVFTILFTQHRHDHMTSLDTEKVSKISLVDLAGSER 254

  Fly   233 VRRTGHEGVARQEGVNINLGLLSINKVVMSMA------------AGHTVIPYRDSVLTTVLQASL 285
            ...:|.:|:..:||.|||..|.::.||:.::|            .....|||||||||.:|:.:|
Zfish   255 ADSSGAKGMRLKEGANINKSLTTLGKVISALADMVSPPQHGSKKRRSDFIPYRDSVLTWLLRENL 319

  Fly   286 TAQSYLTFLACISPHQCDLSETLSTLRFGTSAKKLRLNPM---------------QVARQKQSLA 335
            ...|....:|.:||...:..|||||||:...||:::.|.:               :|.|.|:.|.
Zfish   320 GGNSRTAMIAALSPADINYEETLSTLRYADRAKQIKCNAVINEDPNARLVRELKEEVNRLKELLL 384

  Fly   336 ARTTHVFRQALCTSTAIKSNAANHNSIV-------VPKSKY---STTKPLSAVLHRTRSELGMTP 390
            :       |.|........:...|.::.       .|...|   ::..|:..|...:.||    |
Zfish   385 S-------QGLSNLITASGSETGHPALAGVLGEPHQPSLSYVQSTSDAPMEGVTPTSPSE----P 438

  Fly   391 KAKKRARE-LLELEETTLELS 410
            .:|:.|.| |.|.|:...||:
Zfish   439 ISKEEAAERLKETEKIIAELN 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 110/355 (31%)
ComEA 606..>645 CDD:441164
kif1caXP_068077671.2 None
Blue background indicates that the domain is not in the aligned region.

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