DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and kif21b

DIOPT Version :9

Sequence 1:NP_001285129.1 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_009304054.2 Gene:kif21b / 570502 ZFINID:ZDB-GENE-130530-537 Length:1669 Species:Danio rerio


Alignment Length:618 Identity:160/618 - (25%)
Similarity:257/618 - (41%) Gaps:144/618 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EPSVVQFPPWSDGKSLIVDQNEFHFDHAFPATISQDEMYQALILPLVDKLLEGFQCTALAYGQTG 90
            ||.|           |:.....|.:|..|.....|.::|.|.:..|::...||:..|..||||||
Zfish    37 EPQV-----------LLGKDKAFTYDFVFDLDAHQQQIYSACVHKLIEGCFEGYNATVFAYGQTG 90

  Fly    91 TGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQENNKDA------IQVYASFIEIYNEKP 149
            :||:|:||......:..:..||:|||:..:|:.:..|:...:.|      .:|.|.|:|:|||:.
Zfish    91 SGKTYTMGTGFDVSVSEDEQGIIPRAVHQLFQGIQKRRLEAQSADIPPPDFKVSAQFLELYNEEI 155

  Fly   150 FDLLGST--PHMPMVAARCQRCTCLPLH------------------SQADLHHILELGTRNRRVR 194
            .||..||  |.     ||.::.. :.:|                  |:.:|...|:||..:|...
Zfish   156 LDLFDSTRDPE-----ARGRKSN-IKIHEDGSGGIYTTGVTSRLVSSEDELLQCLKLGALSRTTA 214

  Fly   195 PTNMNSNSSRSHAIVTIHV---------------------------KSKTHHSRMNIVDLAGSEG 232
            .|.||:.|||||||.|||:                           :.:|..::.:.|||||||.
Zfish   215 STQMNAQSSRSHAIFTIHLCQMRVCPQPQLVNGELNGVSDGSMSQSEYETLSAKFHFVDLAGSER 279

  Fly   233 VRRTGHEGVARQEGVNINLGLLSINKVV-----MSMAAGHTVIPYRDSVLTTVLQASLTAQSYLT 292
            ::|||..|...:||::||.|||::..|:     .|..|||  :|||||.||.:||.||...|...
Zfish   280 LKRTGATGERAREGISINCGLLALGNVISALGDQSKRAGH--VPYRDSKLTRLLQDSLGGNSRTV 342

  Fly   293 FLACISPHQCDLSETLSTLRFGTSAKKLR----LNPMQVARQKQSLAARTTHVFRQALCTSTAIK 353
            .:||:||...|..|||:||::...|:.::    :|..:.::|..:|.|....: :..:....|.|
Zfish   343 MIACVSPSDRDFMETLNTLKYANRARNIKNKVIVNQDKTSQQISALRAEIARL-QMEIMEYKAGK 406

  Fly   354 SNAANHNSIVVPKSKYSTTKPLSAVLHRTRSELGMTPKAKKRARELLELEETTLELSSIHIQDSS 418
            ..|.:..|     ..:|.....:::|.|....|.|..||.:...:.|....|.|..:.:      
Zfish   407 RVACDEGS-----EGFSDLFQENSMLQRENDTLRMRVKAMQETIDHLNTRVTQLLTNGV------ 460

  Fly   419 LSLLGFHSDSDKDRHLMPPPTGQEPRQASSQNSTLMGIVEETEPK--ESSKVQQSMVAPTVPTTV 481
                          :|:...||:...:..:.....:..:||...|  ||..:.:|:..       
Zfish   461 --------------NLLLTKTGETNEEIGNLIQNYIREIEELRSKLLESEAMNESLRR------- 504

  Fly   482 RCQLFNTTISPISLRASSSQRELSGIQPMEETVVASP-------QQPCLRRS----VRLASSMRS 535
                        ||...||:.......|...::.:||       ....:|::    .||....|:
Zfish   505 ------------SLSHLSSRSPYPASHPSAPSIGSSPSVSMEAEMTDVIRQAKLDVERLKKKERN 557

  Fly   536 QNYGAIPKVMNLRRSTRLAGIREHATSVVVKNE 568
            |...:..|...|::..:|     |.....||:|
Zfish   558 QRRKSPEKEKGLKKRAKL-----HPEDSGVKSE 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_001285129.1 KISc 8..325 CDD:214526 115/360 (32%)
KISc 8..318 CDD:276812 113/349 (32%)
ComEA 540..648 CDD:224472 7/29 (24%)
kif21bXP_009304054.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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