DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and kif1ab

DIOPT Version :10

Sequence 1:NP_511125.2 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_009296795.1 Gene:kif1ab / 566766 ZFINID:ZDB-GENE-070912-480 Length:1799 Species:Danio rerio


Alignment Length:788 Identity:196/788 - (24%)
Similarity:317/788 - (40%) Gaps:194/788 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEGAKLSAVRIAVREAPYR-QFLGRREPSVVQFPPWSDGKSLIV------DQNEFHFD-----HA 53
            |.||   :|::|||..|:. :.:|:....::|.   |...:.|:      :...|:||     |.
Zfish     1 MAGA---SVKVAVRVRPFNSREIGKDSKCIIQM---SGNTTTILNPKQPKENKSFNFDYSYWSHT 59

  Fly    54 FPATIS---QDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPR 115
            .|..::   |.::|:.:...::....||:.....||||||.||||:|    .|:...:..||:|.
Zfish    60 TPEDVNYACQKQVYRDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTM----MGKQEKDQEGIIPL 120

  Fly   116 ALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLG-------STPHMPMVAARCQRCTCLP 173
            ...|:|.::....:||. :..|..|::|||.|:..|||.       .....|::....:..:.|.
Zfish   121 LCEDLFTKINDNNDNNM-SYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLMGPYVEDLSKLA 184

  Fly   174 LHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSKTHH----------SRMNIVDLA 228
            :.|..|:..:::.|.:.|.|..||||..||||||:..|....|.|.          |::::||||
Zfish   185 VTSYNDIQDLMDSGNKARTVAATNMNETSSRSHAVFNIIFTQKQHDNDSENTTEKVSKISLVDLA 249

  Fly   229 GSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMA-------------AGHTVIPYRDSVLTTV 280
            |||....||.:|...:||.|||..|.::.||:.::|             ...:.|||||||||.:
Zfish   250 GSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSAPNKNKKKKKVESFIPYRDSVLTWL 314

  Fly   281 LQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKKLRLNPM-------QVARQ-KQSLAAR 337
            |:.:|...|....:|.:||...:..|||||||:...||::|.|.:       ::.|: |:.:|..
Zfish   315 LRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAVINEDPNNRLVRELKEEVARL 379

  Fly   338 TTHVFRQALCTSTAIKSN-AANHNSI--VVPKSKYST----------TKPLSAVLHRTRS----- 384
            ...::.|.|.......|| .||.:||  |..:..:||          :..|||:..|..|     
Zfish   380 KDLLYAQGLGDIIENLSNYKANISSIQAVNQRGDFSTVTNAMTGMSPSPSLSALTSRVGSISSLH 444

  Fly   385 -ELGMTPKAKKRARELLELEETTLELS-----------SIHIQ-DSSLSLLGFHSDSD------- 429
             .:..:|.:::....|.|.|:...||:           :|.:: ::.|:.:|.....|       
Zfish   445 DRIMFSPGSEEAIERLKETEKIIAELNETWEEKLRRTEAIRMEREALLAEMGVAMREDGGTVGVF 509

  Fly   430 ---KDRHLMPPPTGQEP-------------------RQASSQ-----------------NSTLMG 455
               |..||:  ...::|                   ..|||:                 .||...
Zfish   510 SPKKTPHLV--NLNEDPLMSECLLYYIKDGITKVGREDASSRQDIVLSGHFIKDEHCIFTSTTNA 572

  Fly   456 IVEET---EPKESSKVQQSMVAPTVPTTV---------------------------RCQLFNTTI 490
            |.|.|   ||.|.::...:....|.||.:                           |....:|.:
Zfish   573 IGEGTVVLEPCEGAETYVNGKRVTEPTVLKSGNRIIMGKSHVFRFNDPEQARQDRERTPCADTPV 637

  Fly   491 SPISLRASSSQREL---SGI---QPMEETVVASPQQPCLRRSVRLASSMRSQNYGAIPKVMNLRR 549
            .|:..  :.:||||   .||   |.|::.:.....|  .|:....||::..|        ..|..
Zfish   638 EPVDW--AFAQRELLEKQGIDMKQEMDQRLQELEDQ--YRKEREEASNLLEQ--------QRLDY 690

  Fly   550 STRLAGIREHATSVVVKNETDAIPHLRSTV--QKKRTRNVKPAPKAWMANNTKCFLDLLNNGNVK 612
            .::|..:::...|......|:....|...|  .|:.|.....|.:.|.........||| .||..
Zfish   691 ESKLEALQKQVNSRYYPETTEEEEELEDEVPWTKRETELALWAFRKWRFYQFTSLRDLL-WGNAI 754

  Fly   613 QLQEIPGI 620
            .|:|...|
Zfish   755 FLKEANAI 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_511125.2 KISc 8..318 CDD:276812 108/354 (31%)
ComEA 606..>645 CDD:441164 6/15 (40%)
kif1abXP_009296795.1 KISc_KIF1A_KIF1B 4..361 CDD:276816 113/367 (31%)
Kinesin_assoc 358..538 CDD:465047 33/181 (18%)
FHA 514..628 CDD:469597 17/115 (15%)
ERM_helical 647..>702 CDD:466641 14/64 (22%)
KIF1B 828..875 CDD:463574
DUF3694 1273..1428 CDD:463599
PH_KIFIA_KIFIB 1680..1782 CDD:269939
Blue background indicates that the domain is not in the aligned region.

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