DRSC/TRiP Functional Genomics Resources

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Protein Alignment nod and kif21a

DIOPT Version :9

Sequence 1:NP_001285129.1 Gene:nod / 32107 FlyBaseID:FBgn0002948 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_009296478.1 Gene:kif21a / 566481 ZFINID:ZDB-GENE-110411-237 Length:1598 Species:Danio rerio


Alignment Length:660 Identity:175/660 - (26%)
Similarity:269/660 - (40%) Gaps:184/660 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SAVRIAVREAPYR-----------QFLGRREPSVVQFPPWSDGKSLIVDQNEFHFDHAFPATISQ 60
            |.||:|:|..|..           .|:...||.||.      ||     ...|.:|:.|....:|
Zfish     4 STVRVALRIRPQLAKEKIEGCHICTFVMPDEPQVVL------GK-----DKAFTYDYVFDMDSTQ 57

  Fly    61 DEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVT 125
            |.:|......|::...||:..|..||||||:||:|:||......|..|.|||:|||:..:|:.:.
Zfish    58 DNIYSNCTEKLIEGCFEGYNATIFAYGQTGSGKTYTMGTGFDVAIPDEDLGIIPRAVTHLFKGIE 122

  Fly   126 ARQENNKD------AIQVYASFIEIYNEKPFDLLGSTPHMPMVAARCQR---------------- 168
            .|::...:      ..::.|.|:|:|||:..||..:|..|   .:|.|:                
Zfish   123 QRRQQAAEQSRPVPEFKISAQFLELYNEEVLDLFDTTRDM---ESRKQKSHIKIHEDASGGIYTV 184

  Fly   169 -CTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHV------------------- 213
             .|...:.|:|::...|:||..:|....|.||..|||||||.|||:                   
Zfish   185 GVTTRNVSSEAEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHICQIRVCAPADSPPEQDNET 249

  Fly   214 ------------KSKTHHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSM--- 263
                        :.:|..::.:.|||||||.::|||..|...:||::||.|||::..|:.::   
Zfish   250 DNRLAGSSSEMEEFETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDR 314

  Fly   264 AAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKKLRLNPMQV- 327
            :...|.:|||||.||.:||.||...|....:|||||...|..|||:||::...|:.:: |.:.| 
Zfish   315 SKRSTHVPYRDSKLTRLLQDSLGGNSRTVMIACISPSDQDFMETLNTLKYANRARNIK-NKVMVN 378

  Fly   328 -ARQKQSLAARTTHVFRQALCTSTAIKSNAANHNSIVVPKSKYSTTKPLSAVLHRTRSELGMTPK 391
             .|..|.::|..|.:.|                  :.:...:|.|.|.:                
Zfish   379 QDRASQQISALRTEIAR------------------LQMELMEYRTGKRM---------------- 409

  Fly   392 AKKRARELLELEETTLELSSIHIQDSSLSLLGFHSDSDKDRHLMPPPTGQEPRQASSQNSTLMGI 456
                      :.|..||    .|.|.      ||                       :||.|.  
Zfish   410 ----------VGEDGLE----SINDM------FH-----------------------ENSMLQ-- 429

  Fly   457 VEETEPKESSK-VQQSMVAPTVPTTVRCQLFNTTISPISLRASSSQRELSG-----IQPMEE--- 512
            ||....:...| :|:::.|.....|   ||.:...:.:..||.....|:..     |:.:|:   
Zfish   430 VENNNLRMRVKAMQEAIDAQGARLT---QLLSQQANQLLARAGEGSEEIGNMIQNYIKEIEDLRA 491

  Fly   513 -TVVASPQQPCLRRSVRLASSMRSQNYGAIPKVMNLRRSTRLAG-IREHATSVVVKNETDAIPHL 575
             .:.:......|||::..||| |.|.|||....     ||.|.| .....||.:::.....:..|
Zfish   492 KLLESEAVNENLRRNLTRASS-RPQFYGASGSF-----STALLGPDPSQETSDIIEIAKKDLEKL 550

  Fly   576 RSTVQKKRTR 585
            :...:||:.|
Zfish   551 KRREKKKKKR 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nodNP_001285129.1 KISc 8..325 CDD:214526 121/384 (32%)
KISc 8..318 CDD:276812 119/377 (32%)
ComEA 540..648 CDD:224472 11/47 (23%)
kif21aXP_009296478.1 KISc_KIF4 4..372 CDD:276823 121/381 (32%)
KISc 6..378 CDD:214526 121/386 (31%)
SCP-1 <389..809 CDD:114219 49/260 (19%)
Prefoldin 652..747 CDD:298833
CEP63 668..973 CDD:293650
DUF4200 740..834 CDD:290574
Laminin_I 905..>1091 CDD:283627
WD40 1266..1577 CDD:238121
WD40 1272..>1576 CDD:225201
WD40 repeat 1278..1312 CDD:293791
WD40 repeat 1317..1351 CDD:293791
WD40 repeat 1371..1414 CDD:293791
WD40 repeat 1420..1464 CDD:293791
WD40 repeat 1471..1505 CDD:293791
WD40 repeat 1512..1536 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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